Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq37740 93.3 3e-14 seq243752 82.4 6e-11 >seq37740 Length=474 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||||||||| || ||||| ||||| ||| ||| || | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || | ||| || ||| || |||||||| | || |||||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || | || |||||||| || |||||| | |||||| || | || | | || |||| Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTT--CGGACTACA 128 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | || ||||||||||| |||||||| | ||| | || | || ||||| Sbjct 127 ACATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGG 79 >seq243752 Length=40230 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || |||| || | || ||||| |||||||| || || ||| || Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || |||| ||||| ||||||||||| | || ||||||| Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||| ||||| || |||||| | |||||| | ||| || | |||||||| Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 ||||| || ||||| || || || Sbjct 7647 ATTCAGAAAGAATCGACACTGCA 7625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409137612393014