Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq37740 107 2e-18 seq219765 100 3e-16 seq168112 93.3 4e-14 >seq37740 Length=474 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || ||||| || || | || || |||||| | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || || | | |||| || |||| |||||||| || ||||| | || || Sbjct 245 GATACGATTGAGAATG-TGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCA 187 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || ||||| || || || | || ||||| |||||||| Sbjct 186 GCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAA 127 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||| ||||| | || || ||||||||| Sbjct 126 CATCCAAAAGGAATCGACTCTTCATCTAGTG 96 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || |||| || || || || ||||| | || |||||||||||||| | | Sbjct 457 TCAAGGCTAAGATTCAGGATAAGGAAGGAATCCCACCAGATCAGCAACGACTCATTTTTG 398 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| ||||| || || | || ||||| |||||||||||||||||||| ||| Sbjct 397 CCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAATCCA 338 Query 40886 CGCTGCATCTAGT 40898 | || ||||| || Sbjct 337 CCCTCCATCTGGT 325 >seq219765 Length=875325 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||||||||| ||||| ||||| ||||| || | || || || || | Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||| | ||||| | |||||||| ||||| || | || || Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || |||||||| || || || | ||||| | || |||||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||| || | || ||||| Sbjct 73163 ATTCAGAAAGAATCAACTCTGCA 73141 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCAC-GGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||| || ||||||||||| ||||| ||||| ||||| || | || || || || | Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| | ||||| | |||||||| ||||| || | || || Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| || |||||||| || || || | || ||| | || || || Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| ||||| || | || |||||| ||||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTG 72905 >seq168112 Length=81752 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 || |||||| | || || || | || || || || |||| ||||| |||| |||||| Sbjct 32663 GAAAACCCCGGGCGATTTGTTTTATTTCCAATTCAGTACCATGACATTTGGCAGATGTAC 32722 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA-CACGAG 116709 ||||| || || || || |||||||| | || ||||||||| |||| || || | || Sbjct 32723 AAAAAAGCTGAAGCATCATTCTGGACAGCAGAAGAGGTGGACTTGTCTAAAGATCTTGAT 32782 Query 116710 CGACTGGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTT 116768 | |||||||| ||| ||| | || || ||||| ||| ||||| ||||| || | Sbjct 32783 C-ACTGGGAGAAGCTGAAACCAGAA-GAAAAGCATTTTATCTCACACGTACTGGCATTCT 32840 Query 116769 TCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGT 116805 | || || || || || || || || || ||| |||| Sbjct 32841 TTGCTGCAAGTGATGGGATAGTGAATGAAAATTTGGT 32877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513084898023760