Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq219765 138 1e-27 seq243752 109 5e-19 seq129645 87.8 2e-12 >seq219765 Length=875325 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||| |||||||||||||| || |||||| ||| || Sbjct 73135 ACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73194 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| ||||||||||||| ||||| ||||| ||||| || |||||| Sbjct 73195 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73254 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | ||| | |||||| | | ||| || || | || | || ||| Sbjct 73255 ATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73314 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || |||||||| || |||||||| Sbjct 73315 CCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||| |||||||||||||| || |||||| ||| || Sbjct 73363 ACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73422 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| | ||||||||||| ||||| ||||| ||||| || |||||| | Sbjct 73423 AGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGA 73482 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | ||| | ||| || | || | || ||||| | ||| | ||||| Sbjct 73483 ATTTTTGCCTTGACATTTTCAATGGTATCTGATGGT-TCAACCTCTAGGGTAATAGTTTT 73541 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||||||||| Sbjct 73542 CCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| || || | || || ||||| |||||||| ||||| || || || ||| || Sbjct 72905 CACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTC 72964 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || ||||| ||||| ||||||||||||| ||||| ||||| ||||| || |||||| Sbjct 72965 AAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTG 73024 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | |||||| | | ||| || || | || | || || Sbjct 73025 GATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTT 73084 Query 118709 GCC-GGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || |||||||| || |||||||| Sbjct 73085 GCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq243752 Length=40230 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| || ||||| |||||||||||||| || ||||| ||| || Sbjct 7847 ACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCA 7906 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| ||||||||||||||||||| ||||| || || || |||||| Sbjct 7907 AGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGG 7966 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | || | |||||| | ||| ||||| | || | || ||| Sbjct 7967 ATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGTCTTG 8026 Query 118710 CCGGT 118714 || || Sbjct 8027 CCAGT 8031 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || || | ||| || ||||| |||||||||||||| || |||||| ||| || Sbjct 7619 ACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 7678 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| | || |||||||| ||||| || || || || || || ||| Sbjct 7679 AGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGG 7738 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | || | |||||| | | ||| ||||| | || | || ||| Sbjct 7739 ATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTG 7798 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| |||||||| Sbjct 7799 CCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 >seq129645 Length=3385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664 || ||||||||||| ||||| ||||| ||||| || |||||| ||||||| || || Sbjct 705 TATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACA 646 Query 118665 TGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTT 118723 | ||| | ||| || | || | || ||||| | ||| | ||||| || || || || || Sbjct 645 TTTTCAATGGTATCTGATGGT-TCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTT 587 Query 118724 TACAAAAATCTGCAT 118738 |||||||||||||| Sbjct 586 GACAAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432078180841492