Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq73079 96.9 6e-15 seq810 95.1 2e-14 seq324 91.5 3e-13 >seq73079 Length=71260 Score = 96.9 bits (106), Expect = 6e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| | ||||||||||||| ||||| || ||||| || |||||||| Sbjct 25336 GCATTTTTTGGAGCAATGATAAATTCTTTTATTCATGTGATAATGTATACATATTATGGA 25277 Query 52117 ATGGCCGCTTGTGGTCCTATGTTC-AGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 | || || ||| || ||| ||||| ||| ||||||||||||||||| | || | Sbjct 25276 GTAGCTGCCCTTGGACCAGAATTCCAGAAA-TATTTATGGTGGAAACGTTATTTGACGAG 25218 Query 52176 AATGCAGTTGGT 52187 |||||||||| Sbjct 25217 GCTGCAGTTGGT 25206 >seq810 Length=368314 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 189474 TGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTG 189533 |||||| ||||| ||||||||| | || || ||||||||||||| ||||||||| | | Sbjct 132389 TGGTGAATGAAGGTAAAATGCATGGATTCTTGAGAATGTATTGGGCCAAGAAGATATTGG 132448 Query 189534 AATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACG 189593 | ||||| | | |||| || | |||||| || || |||||||| |||| || Sbjct 132449 AGTGGACCAAATCACCAGAGAATGCTTTGGCAGATGCCATTTATTTGAATGACAAATATA 132508 Query 189594 AACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 | || || ||| |||||||| || ||||| ||| Sbjct 132509 ATCTTGATGGCCGAGATCCTAATGGCTACGTGGGT 132543 >seq324 Length=236839 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 135637 GATCCTGTTTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTA 135696 |||||||| |||| |||||||| | | |||||| ||||| | || ||||| || ||| Sbjct 140851 GATCCTGTACTGCACATAGAACTACGAAAATGGGCAGATGTAATGATCATAGCACCATTA 140910 Query 135697 ACGGCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAAT 135741 |||||||| ||||||||||| ||||||||| | || |||||| Sbjct 140911 GATGCAAATACTTTAGCAAAAATTGCTAATGGTCTCTGTGATAAT 140955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919372445716040