Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq243752 95.1 2e-14 seq219765 89.7 8e-13 seq149148 89.7 8e-13 seq316807 87.8 3e-12 >seq243752 Length=40230 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | || ||||| | || |||||||| || || |||||||| Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | || ||| || | |||||| ||||||||||| | | || ||||| || ||| Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||||||||| Sbjct 7721 ATTCCTTCTTTATCTTG 7737 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || |||||||| || || |||||||| Sbjct 7829 CCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGAC 7888 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | || ||| || | |||||| |||||||| || | | |||||||| |||||| Sbjct 7889 AATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGA 7948 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 7949 ATTCCTTCTTTGTCTTG 7965 >seq219765 Length=875325 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| || | | ||||| || | ||| |||||||| || || |||||||| Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | || ||| || | |||||| ||||||||||| | | || ||||| |||||| Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 73465 ATGCCTTCTTTGTCTTG 73481 >seq149148 Length=2963 Score = 89.7 bits (98), Expect = 8e-13 Identities = 175/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 10362 AGTGCATATGATTATATTGTTTCAGCACATGATAAAAAATTAATAAAAACTGATTTAATT 10421 ||||||||||| ||||||||| | || | | |||| | | | || |||||| | Sbjct 2081 AGTGCATATGACTATATTGTTCCTGCCAAAGGTAAAGAGATTGTGAAGACTGATATCCAA 2022 Query 10422 ATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAAT 10481 ||| |||| | || || |||| | | | || || | |||| || || || Sbjct 2021 ATATCCGTTCCAGATGGGTGCTATGGACGTGTGGCGCCTCGCTCTGGGTTGGCAGCGAAA 1962 Query 10482 AAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTA 10541 | ||||||||| |||| || ||||| || || |||| || ||||| || || ||||| Sbjct 1961 AGCTTTATTGATGTTGGTGCCGGAGTGATAGATCAAGACTACAGAGGCAACGTAGGAGTT 1902 Query 10542 ATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAA 10601 | || || ||| ||| | || |||| | |||| | ||| || ||||| ||||| Sbjct 1901 GTTTTGTTCAATTTTTCCGAGACTGACTTTAAAGTAAACAAAGGCGACAGAATCGCTCAA 1842 Query 10602 TTAATATGTGAAAAAATTT 10620 | |||||||||| ||||| Sbjct 1841 CTGATATGTGAAAGAATTT 1823 >seq316807 Length=102120 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||||||||| | || | ||| | ||||| ||||| || ||||| || || Sbjct 35861 CCACCTCTAAGTCTCAGCACTAGATGGAGGGTAGACTCTTTTTGAATGTTATAGTCAGAT 35920 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || | ||||| || ||||||||||| || |||||||| |||||| Sbjct 35921 AGAGTACGTCCATCTTCAAGCTGTTTCCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 35980 Query 146171 ATTCCT 146176 || ||| Sbjct 35981 ATGCCT 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740446332593920