Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq219765 120 3e-22 seq168112 107 2e-18 seq243752 95.1 1e-14 >seq219765 Length=875325 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| || || |||||||| || || || | || ||||| || || Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| |||||| | ||| ||||| |||||| | || || || || Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||||||||| | ||||| ||| || ||||| ||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| ||||| || |||| ||| | || || || |||| Sbjct 73163 ATTCAGAAAGAATCAACTCTGCACTTGGTCCTTCGTCTAAGAGGAGGTA 73115 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || || ||||| || ||| | || |||||||| || Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| ||||| | ||| ||||| |||||| | || || || || Sbjct 73511 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 73452 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||||||||| | ||||| ||| || ||||| ||| Sbjct 73451 CAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73392 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||||||||| || |||| ||| | || || || |||| Sbjct 73391 ATTCAGAAAGAATCGACTCTGCACTTGGTCCTTCGTCTAAGAGGAGGTA 73343 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACA-GGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||| || |||||||| || || ||| ||||| || || || | || ||||| || || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| | ||| ||||| |||||| | || || || || Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || || ||||||||||| | ||||| || || |||||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| |||||||| || || ||| | || ||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTGCTT 72902 >seq168112 Length=81752 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 57523 AAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGT 57582 |||| || ||| | ||||||| | ||||| ||| | || | ||||||||| | |||| Sbjct 32661 AAGAAAACCCCGGGCGATTTGTTTTATTTCCAATTCAGTACCATGACATTTGGCAGATGT 32720 Query 57583 ACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATC-TG 57641 ||||||| || |||||||| || ||||| | ||||| || ||| ||||||| |||| || Sbjct 32721 ACAAAAAAGCTGAAGCATCATTCTGGACAGCAGAAGAGGTGGACTTGTCTAAAGATCTTG 32780 Query 57642 AGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTT 57701 | | | ||||| || ||| | || | ||||||| |||||| |||| || Sbjct 32781 ATC-ACTGGGAGAAGCTGAAACCAGAAGAAAAGCATTTTATCTCACACGTACTGGCATTC 32839 Query 57702 TTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 || || ||| ||||| || || || || |||||||| Sbjct 32840 TTTGCTGCAAGTGATGGGATAGTGAATGAAAATTTGGT 32877 >seq243752 Length=40230 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || || | || ||||| || || Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| || || ||||| | || || || || Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| ||||| | ||||| ||| || ||||| ||| Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||||||||| || ||| | || ||| | ||||| || || Sbjct 7647 ATTCAGAAAGAATCGACACTGCATTTAGTCCTTCGTCTGAGAGGTGG 7601 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || || || | || ||||| || || |||| | || | |||||| Sbjct 8031 ACTGGCAAGACCATTACACTTGAGGTTGAGCCATCAGACACCATTGACAATGTCAAAGCT 7972 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | ||| ||||| ||||| | || || || ||||||||||| || || ||||||||| Sbjct 7971 AAAATCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAAA 7912 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 || | ||||| || || ||||| |||||||| |||||||| || || || Sbjct 7911 CAACTTGAAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACAC 7852 Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421 |||| ||| | ||||| || |||| Sbjct 7851 TTGGTCCTTCGTCTGAGAGGTGGTA 7827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443919807115920