Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq168112 165 1e-35 seq14293 109 7e-19 >seq168112 Length=81752 Score = 165 bits (182), Expect = 1e-35 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||||||||| |||||||| || ||||| || |||| ||| ||| |||||| Sbjct 32874 AAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAAAA 32815 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 | ||||| |||||| | || || | ||| | || | ||||||||| | ||||| ||| Sbjct 32814 TGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCTCT 32755 Query 34086 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 34145 || ||||||| |||||||| || || ||||| ||||| | ||| |||||||| || || Sbjct 32754 TCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACTGA 32695 Query 34146 ATTGGGAAAATAACAAATC 34164 ||||| || | |||||||| Sbjct 32694 ATTGGAAATAAAACAAATC 32676 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| || | ||| || | || || ||| || || || ||||||| ||| ||||| | Sbjct 34282 CCTCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCT 34223 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | | ||| || |||| ||| || || || || || || || ||||| || |||||||| | Sbjct 34222 TCAACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAG 34163 Query 33724 CAATAAGTCTCTCTCCATAACCGGCGCT-GTCATGT---ATCCACTTTTGAGCCCAATCG 33779 | | || ||||| | || || | | || || |||||||| |||||||| Sbjct 34162 CCACAACCCTCTCACTGTATG-GGTGTTCGTGATCCCCAATCCACTTCATGGCCCAATCA 34104 Query 33780 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820 || |||||| | ||||| |||| || || ||||||||||| Sbjct 34103 GCTTTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAA 34063 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/145 (74%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 33233 TCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA-GA------CATAACTC 33285 |||||||||||| ||||| ||| || |||| | || ||| || ||| || | Sbjct 35409 TCTTTAAAAGTCTTCATCTGTAGAGAACTGATGG-CTAGTTGGCGATTTGTTCATTACCC 35351 Query 33286 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33345 |||| || || |||||||| || ||||| || ||||| || |||||||||||||||| Sbjct 35350 CCATCTTCTGATATTCACCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCCAATGATA 35291 Query 33346 TATTTTCCATGAAATCAAACGGATT 33370 | | |||||||| ||||| ||||| Sbjct 35290 TGTGCTCCATGAAGTCAAATGGATT 35266 >seq14293 Length=520737 Score = 109 bits (120), Expect = 7e-19 Identities = 163/226 (72%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || || || || |||||||||| | | | | ||||||||| | |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63307 || || | | |||| || || ||| ||||| ||||||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCA 63366 ||||| || | || ||||| || || || ||||| || |||||| ||||| ||| | | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63412 || ||| | |||||| ||||| || || || || | | |||| || Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGG 326348 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62373 AGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62432 ||||| | || || | ||||| ||||| ||||| || | || || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 62433 GTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62492 || || | || | ||||| || ||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 62493 GGTGCCACCAATAAACTATTTCTAAGACCGTA 62524 || |||| || | ||| ||||| | ||| || Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687 || || ||||| || || | ||||||||| || | |||||| || || || || | | Sbjct 402231 TAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGCTGCAAAG 402290 Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||| |||||||| || | || || || | || || || ||||| |||||||| ||| Sbjct 402291 TAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAATGGGTAA 402350 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | | || || || || |||| ||||||||||||| || || || | ||| || Sbjct 402351 CGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACGGTGTTTC 402410 Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62843 || || || ||||| || ||| ||| || ||||| Sbjct 402411 TTGTTGGAAATTTCTGC--CTGAAAT-TGAAAATAA 402443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627208572719280