Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq168112 104 2e-17 seq14293 86.0 6e-12 >seq168112 Length=81752 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || || | ||| || || ||||| |||||||| || ||||| | || || || || Sbjct 34280 TCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCTTC 34221 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || |||||||| || ||||| || ||||| || |||||||| ||||| || Sbjct 34220 AACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAGCC 34161 Query 11774 ACTACTCTTTCTCCATATACCTTGTTGCTAGAT-----ATCCATTTTCTGGCCCAATCAG 11828 || || || || | ||| | ||| | ||| ||||| || |||||||||||| Sbjct 34160 ACAACCCTCTCACTGTATGGGT-GTTCGT-GATCCCCAATCCACTTCATGGCCCAATCAG 34103 Query 11829 CTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAA 11872 |||||||| | || || || ||| || || || ||||| ||| Sbjct 34102 CTTTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAACAAA 34059 >seq14293 Length=520737 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 37928 TATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGAC 37987 |||| | ||| | ||| || | ||||| |||||| | || ||||||||| |||| Sbjct 326114 TATAAAGTTTCTCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGAC 326173 Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047 |||||| || ||| || ||| | || || || ||| || | ||||| | ||| | Sbjct 326174 ACATTAAAGTCCAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACA 326233 Query 38048 ATGCAGTAAATAA-ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTT 38106 || ||| | || ||| ||| || | |||||| || || ||| || ||||| Sbjct 326234 GGGC-GTAGAAAAGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAGTCG 326292 Query 38107 AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCT 38165 ||||| || || | ||| || ||||||||||||| ||| || | | ||||||||||| Sbjct 326293 AGAAACTCAAAAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGGTCT 326351 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 37115 CTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATA 37174 || |||| || || |||| |||| ||| || ||||| || || || | || | ||| | Sbjct 324713 CTTTCAACAGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAA 324772 Query 37175 TATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAG 37234 ||||||| || || | || |||||||| || || | | ||||||| || || || | Sbjct 324773 TATTGCTGGTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTG 324832 Query 37235 TAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCAT 37273 |||||||||| || || || || || ||||| | |||| Sbjct 324833 TAGGCATTGGAGCCATCAGCAGACTGTTTCTGACACCAT 324871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466583930159440