Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq168112 165 1e-35 seq14293 109 7e-19 >seq168112 Length=81752 Score = 165 bits (182), Expect = 1e-35 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||||||||| || ||||| || ||||| || |||| ||| ||| |||||| Sbjct 32874 AAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAAAA 32815 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 | ||||| | |||| | || || | ||| | || | ||||||||| | ||||| ||| Sbjct 32814 TGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCTCT 32755 Query 36662 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 36721 || ||||||| |||||||| || || ||||| ||||| | ||| |||||||| || ||| Sbjct 32754 TCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACTGA 32695 Query 36722 ATTGGAAAAATAACAAATC 36740 |||||||| | |||||||| Sbjct 32694 ATTGGAAATAAAACAAATC 32676 >seq14293 Length=520737 Score = 109 bits (120), Expect = 7e-19 Identities = 163/226 (72%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || || || || |||||||||| | | | ||||||||||| | |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 66100 || || | | |||| || || ||| ||||| ||||||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCA 66159 | ||| |||| || ||||| || || || ||||| || |||||| ||||| ||| | | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 66160 TAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205 || ||| |||||| ||||| || || || || | | |||| || Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGG 326348 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 65166 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 65225 ||||| |||| || | || || ||||| ||||| || | || || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 65226 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 65285 || || | || | ||||| || ||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 65286 GGTGCCACCAATAAACTATTTCTAAGACCGTA 65317 || |||| || | ||| ||||| | ||| || Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 || || || || || || | ||||||||| || |||||||| || || || || | | Sbjct 402231 TAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGCTGCAAAG 402290 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||| ||||| || || | || || || | || || || |||| |||||||| ||| Sbjct 402291 TAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAATGGGTAA 402350 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 | | || || || ||||||| ||||||||||||| || || || | ||| || Sbjct 402351 CGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACGGTGTTTC 402410 Query 65601 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 65636 || || || ||||| || ||| ||| || ||||| Sbjct 402411 TTGTTGGAAATTTCTGC--CTGAAAT-TGAAAATAA 402443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655446310948840