Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq219765 138 1e-27 seq243752 111 2e-19 >seq219765 Length=875325 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || ||| | || ||||| | || || ||||| |||||||| ||||| | Sbjct 73117 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGAC 73176 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || ||||| |||||| |||| ||||| || ||||| ||||| Sbjct 73177 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73236 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| |||||| ||| | | ||| | ||||| | |||||| || Sbjct 73237 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACT 73296 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||| || | |||||||| || | ||||||||||| || |||||| || Sbjct 73297 TCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCATACCT 73347 Score = 125 bits (138), Expect = 7e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 139534 ATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC 139593 || ||| || || | ||| | ||||| || | || || ||||| |||||||||||||| Sbjct 72884 ATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATC 72943 Query 139594 GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 139653 || || | ||||| || ||||| |||||| |||| ||||| || ||||| || Sbjct 72944 AGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGG 73003 Query 139654 AGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713 ||| |||||||||||||| |||||| ||| | | || | ||||| | |||||| Sbjct 73004 AGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTC 73063 Query 139714 CACCTCAACGGTCACCGTCTTGCC-GGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || |||| || | |||||||| || | ||||||||||| || |||||| || Sbjct 73064 AACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCATACCT 73119 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || ||| | || ||||| | || || ||||| |||||||| ||||| | Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || ||||| |||||| | || ||||| || ||||| ||||| Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| |||||| || | | ||| | || || | || || || Sbjct 73465 ATGCCTTCTTTGTC-TTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAAC 73523 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | || || || || | || || || || || ||||| Sbjct 73524 CTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq243752 Length=40230 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| |||| | ||| | ||||| || | || || ||||| |||||||| ||||| Sbjct 7598 TGGCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCT 7657 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| ||||| || |||||||||||| | || ||||| || ||||| || Sbjct 7658 GACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGT 7717 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || |||||||| || |||||| ||| | | || | ||||| | |||||| Sbjct 7718 GGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCA 7777 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||| || | |||||||| || | || || || || || |||||| Sbjct 7778 ACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 7828 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || ||||| | || || ||||| |||||||| ||||| | Sbjct 7829 CCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGAC 7888 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||||| || ||||| |||||| |||| ||||| |||||||| ||||| Sbjct 7889 AATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGA 7948 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| |||||| ||| | | || | ||||| | ||||| ||| Sbjct 7949 ATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACC 8008 Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740 |||| || | |||||||| || Sbjct 8009 TCAAGTGTAATGGTCTTGCCAGT 8031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494009048679200