Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq168112 152 7e-32 seq14293 136 6e-27 >seq168112 Length=81752 Score = 152 bits (168), Expect = 7e-32 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 ||||||||||||||||| || ||||| || ||||| || |||| ||| ||| |||||| Sbjct 32874 AAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAAAA 32815 Query 50404 TGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 50463 || ||||| | ||| | || || | ||| | || | ||||||||| | || || ||| Sbjct 32814 TGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCTCT 32755 Query 50464 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 50523 || ||||||| |||||||| || || ||||| ||||| | ||| |||||||| || || Sbjct 32754 TCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACTGA 32695 Query 50524 ATTGGGAAAATAACAAATC 50542 ||||| || | |||||||| Sbjct 32694 ATTGGAAATAAAACAAATC 32676 Score = 105 bits (116), Expect = 1e-17 Identities = 158/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| || | ||| || || || ||| ||| || || || ||||||| ||| ||||| | Sbjct 34282 CCTCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCT 34223 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | ||| || |||| ||||| || ||||| || || || ||||| || || ||||| | Sbjct 34222 TCAACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAG 34163 Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCT-GTCATGT---ATCCACTTTTGAGCCCAATCG 50157 | |||| ||||| | || || | | || || |||||||| |||||||| Sbjct 34162 CCACAACCCTCTCACTGTATG-GGTGTTCGTGATCCCCAATCCACTTCATGGCCCAATCA 34104 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 || |||||| | ||||| |||| || || ||||||||||| Sbjct 34103 GCTTTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAA 34063 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 49611 TCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA-GA------CATAACTC 49663 |||||||||||| ||||| ||| || |||| || ||| || ||| || | Sbjct 35409 TCTTTAAAAGTCTTCATCTGTAGAGAACTGATGG-CTAGTTGGCGATTTGTTCATTACCC 35351 Query 49664 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 49723 |||| || || |||||||| || ||||| || ||||| || |||||||||||||||| Sbjct 35350 CCATCTTCTGATATTCACCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCCAATGATA 35291 Query 49724 TATTTTCCATGAAATCAAACGGATT 49748 | | |||||||| ||||| ||||| Sbjct 35290 TGTGCTCCATGAAGTCAAATGGATT 35266 >seq14293 Length=520737 Score = 136 bits (150), Expect = 6e-27 Identities = 170/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || || || || |||||||||||| | | ||||||||||||| ||||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 79979 || || ||| |||| || || ||| ||||| ||||||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCA 80038 ||||| |||| || || || || || || ||||| || |||||| ||||| ||| | | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 80039 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC 80086 || ||| | |||||| ||||| || || || || | | |||| |||| Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGGTC 326350 Score = 104 bits (114), Expect = 3e-17 Identities = 158/223 (71%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 79293 TCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGC 79352 ||||| ||| |||||||| || || | ||| || || | |||||||| || || || || Sbjct 402224 TCCTGGGTAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGC 402283 Query 79353 TCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAA 79412 | | | ||||| ||||| || || | || || || | || || || |||| ||||| Sbjct 402284 TGCAAAGTAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAA 402343 Query 79413 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 79472 ||| ||| | | || || || ||||||| ||||||||||||| || || || | Sbjct 402344 TGGGTAACGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACG 402403 Query 79473 ATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAA 79515 ||| |||| || |||||||| || ||| ||| || ||||| Sbjct 402404 GTGTTTCTTGTTGGAAATTTCTGC--CTGAAAT-TGAAAATAA 402443 Score = 93.3 bits (102), Expect = 6e-14 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 80689 ttttttGTT-TCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATC 80747 ||| ||| | || ||||||| ||| || || || |||| ||||| | || |||||||| Sbjct 329155 TTTCTTGCTCTCTTTGTGTAAATTAGAAACAGCGATTCGCGCGGCCAGGATAGCATAATC 329214 Query 80748 TGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 80807 |||||||| ||||| ||| |||||| |||| ||||||| | |||| | || || || Sbjct 329215 TGGATGTTTCGTAGTCATAGTCGCTGCTGTTTCTGCTGCCAAATTGTCGAGCTCAACAGT 329274 Query 80808 TGTTACTCCATTATATATTCCTTGGATAACCTT 80840 |||||| || | || | ||| | ||| || || Sbjct 329275 TGTTACACCTTGGTACAATCCATTGATGACTTT 329307 Score = 89.7 bits (98), Expect = 7e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 ||||| |||| || | || || ||||| ||||| || | || || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || || | || | || || || ||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTA 79196 || |||| || | ||| ||||| | ||| || Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715293362517640