Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq219765 107 2e-18 seq243752 84.2 2e-11 seq37740 84.2 2e-11 >seq219765 Length=875325 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || | | ||||| || || || |||||||| || ||||||||||| | Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| | ||||||||| ||| |||| || | ||||||||| || Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| ||||||| || || | ||| | ||| ||||| Sbjct 73465 ATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACC 73524 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAA 20215 || | |||||| ||||| || || | || ||||||||||| ||||| | |||| Sbjct 73525 TCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCATCTGTAAA 73578 >seq243752 Length=40230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || ||||| ||||| |||||||| || ||||||||||| || ||| |||||| Sbjct 7619 ACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 7678 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| ||||||| | ||||||||| || | |||||||| || Sbjct 7679 AGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGG 7738 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||| || | | ||| | || || || || | |||||||| ||| Sbjct 7739 ATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTG 7798 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | || |||||||| || ||||| Sbjct 7799 CCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 >seq37740 Length=474 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCT 20056 ||| | ||| || || ||||| ||||| |||||||| || | | || | || |||| Sbjct 96 CACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTC--CGAAAGGGTACGACCATCT 153 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || | |||||| || ||| | || |||| ||| ||||| || | ||||||||||| Sbjct 154 TCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 213 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || ||||| | ||| | ||| | ||| ||||| ||||| ||| Sbjct 214 TGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTT 273 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || ||||| ||||| || ||||||||||| Sbjct 274 TTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417892508409681