Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq219765 190 5e-43 seq243752 185 2e-41 seq37740 149 1e-30 seq316807 114 3e-20 seq168112 95.1 3e-14 seq129645 89.7 1e-12 seq810 86.0 1e-11 seq642 84.2 5e-11 >seq219765 Length=875325 Score = 190 bits (210), Expect = 5e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| | ||| || | || | || |||||||||||||| || || || Sbjct 73342 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCT 73401 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | || ||||| |||||||| ||||||||||| || | ||||||||| ||| Sbjct 73402 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGA 73461 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| ||||| || |||||||| | |||||| ||||| Sbjct 73462 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCA 73521 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| |||||||| || ||||| || || || ||||| |||||||| Sbjct 73522 ACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| | ||| || | || | || |||||||||||||| || || || Sbjct 73114 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCT 73173 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | || ||||| |||||||| |||||||| || || | ||||||||| ||| Sbjct 73174 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGA 73233 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || || || ||||| |||||||| | ||| || || || Sbjct 73234 GGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCA 73293 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| ||||| || || ||||||||||| || |||||||| Sbjct 73294 ACTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 167 bits (184), Expect = 5e-36 Identities = 166/214 (78%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| ||| | || |||||||||||||| ||||| ||||| | |||| || || Sbjct 72902 AAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATC 72961 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||| |||||||| || || | ||||||||| ||||| || |||||||| || Sbjct 72962 TTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTC 73021 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || || || ||||| ||||| || | ||| || || || || || |||||||| || Sbjct 73022 TTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGT 73081 Query 104527 CTTACC-AGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || ||||||||||| || |||||||| Sbjct 73082 CTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq243752 Length=40230 Score = 185 bits (204), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 104328 TTATT--CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATA 104385 ||||| || ||||| || | ||| |||| ||| | ||| |||||||||||||| || || Sbjct 7594 TTATTGGCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTA 7653 Query 104386 GTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATC 104445 || || | ||| | || ||||| |||||||| ||||||||||| || | ||||||||| Sbjct 7654 ATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATC 7713 Query 104446 AGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG 104505 || || |||||||||||||| || || || ||||| ||||| || | ||| || || Sbjct 7714 TGGTGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGG 7773 Query 104506 TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| |||||||| ||||| ||||| || || || ||||| |||||||| Sbjct 7774 CTCAACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | |||| ||| |||||||||||||| || || || Sbjct 7826 ATACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCT 7885 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||| |||||||| |||||||| || || | ||| ||||| ||| Sbjct 7886 GACAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGA 7945 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || || || || ||||| ||||| || | ||| || || || Sbjct 7946 GGAATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCA 8005 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| |||||||| ||||| ||||| Sbjct 8006 ACCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq37740 Length=474 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || |||||||| | || ||||| || || || || ||||| || || || | ||| ||| Sbjct 94 AGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCT 153 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||| || ||||| || |||| ||| ||||| || || ||||||||||| || Sbjct 154 TCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 213 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | ||||| | |||||| || | |||||||| Sbjct 214 TGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTT 273 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | |||||| || || || ||||| Sbjct 274 TTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Score = 111 bits (122), Expect = 4e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| ||||| | || ||||| ||||| || || |||||||| || || | || || Sbjct 321 AAGTACCAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCATC 380 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || |||||||| || | || ||||| || || |||||||| ||||| Sbjct 381 CTCAAGCTGCTTGCCGGCAAAAATGAGTCGTTGCTGATCTGGTGGGATTCCTTCCTTATC 440 Query 104467 CTGAATCTTTGCTTTTACATTTTC 104490 ||||||||| || || |||||||| Sbjct 441 CTGAATCTTAGCCTTGACATTTTC 464 >seq316807 Length=102120 Score = 114 bits (126), Expect = 3e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || || |||||||| | ||||| ||||| ||||| |||||||||||| Sbjct 35861 CCACCTCTAAGTCTCAGCACTAGATGGAGGGTAGACTCTTTTTGAATGTTATAGTCAGAT 35920 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||| | || ||||| || ||||| || |||||||| | |||||| ||||| ||||| Sbjct 35921 AGAGTACGTCCATCTTCAAGCTGTTTCCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 35980 Query 104453 ATTCCT 104458 || ||| Sbjct 35981 ATGCCT 35986 >seq168112 Length=81752 Score = 95.1 bits (104), Expect = 3e-14 Identities = 122/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 269068 CTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGC---CTTA 269124 |||||| | ||| ||| |||| ||||| |||| ||||| ||| || | | || Sbjct 34086 CTGTGTTACAAAGAAAGCTGATTGGGCCATGAAGTGGATTGGGGATCACGAACACCCATA 34145 Query 269125 CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGC 269184 | | || ||| | || |||||||| ||||| ||||| ||||| || || || || ||||| Sbjct 34146 CAGTGAGAGGGTTGTGGCTTTTGCTGCTGTGGAAGGCATATTTTTCTCTGGCTCGTTTGC 34205 Query 269185 CGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 || || || ||||||||||| | ||| | |||||||| |||| || Sbjct 34206 TGCCATTTTCTGGTTGAAGAAGCGGGGCATAATGCCAGGCCTAACATT 34253 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 268701 GATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTG 268760 ||||||| |||||||||| ||| | ||| || ||| |||||||||| | || | | Sbjct 32676 GATTTGTTTTATTTCCAATTCAGTACCATGACATTTGGCAGATGTACAAAAAAGCTGAAG 32735 Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGA-CTTAATAGATTGGAAAAAT 268819 | || || ||||| | |||||| || || ||||| | || ||| || | ||| | || Sbjct 32736 CATCATTCTGGACAGCAGAAGAGGTGGACTTGTCTAAAGATCTTGATC-ACTGGGAGAAG 32794 Query 268820 TTAAAACCAGAAGAAAGAAGATTTATATCTTATA--TTCTTGCGTTTTTTGCAGTTAGTG 268877 | |||||||||||| ||| || ||||| | | | || || || ||||| | |||| Sbjct 32795 CTGAAACCAGAAGAA--AAGCATTTTATCTCACACGTACTGGCATTCTTTGCTGCAAGTG 32852 Query 268878 ATGGTATCGTTAACGAAAATCTAGTA 268903 |||| || || || |||||| | ||| Sbjct 32853 ATGGGATAGTGAATGAAAATTTGGTA 32878 >seq129645 Length=3385 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| || || || || ||||| |||||||| | |||||| || || || || Sbjct 2 CCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTATCTGAGGGCTCAACTTCA 61 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| ||||| || || ||||||||||| || |||||||| Sbjct 62 AGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 105 >seq810 Length=368314 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 238625 AGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAG 238684 ||| ||||||||| | ||||| ||||||||||||| || |||||| | || ||||| | Sbjct 132399 AGGTAAAATGCATGGATTCTTGAGAATGTATTGGGCCAAGAAGATATTGGAGTGGACCAA 132458 Query 238685 ATCTCCAAAGGAAGCTCTTAGATATAGTATTTATCTGAACGATAAATACGAACTCGACGG 238744 ||| ||| || | ||| | | || |||||| |||| || ||||| | || || || Sbjct 132459 ATCACCAGAGAATGCTTTGGCAGATGCCATTTATTTGAATGACAAATATAATCTTGATGG 132518 Query 238745 TACGGATCCTAACGGATACGTAGGT 238769 |||||||| || ||||| ||| Sbjct 132519 CCGAGATCCTAATGGCTACGTGGGT 132543 >seq642 Length=496311 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| |||||||| ||||| |||| || | ||| ||||| || ||||| |||||||||| Sbjct 66807 CTTTTTGAATATTGTAGTCCGATAATGTGCGACCATCTTCCAGCTGTTTACCAGCAAAAA 66866 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 | | ||||| ||||||||||| || ||| Sbjct 66867 TCAATCTCTGCTGATCAGGAGGAATACCT 66895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146509475678908