Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq323587 95.1 6e-15 seq305302 95.1 6e-15 seq97875 95.1 6e-15 seq303549 93.3 2e-14 seq56357 93.3 2e-14 seq2980 93.3 2e-14 seq236050 91.5 8e-14 seq223876 91.5 8e-14 seq168555 91.5 8e-14 seq2528 91.5 8e-14 seq122560 89.7 3e-13 seq90899 89.7 3e-13 seq774 89.7 3e-13 seq296314 87.8 9e-13 seq275119 87.8 9e-13 seq235819 87.8 9e-13 seq202538 87.8 9e-13 seq182800 87.8 9e-13 seq147716 87.8 9e-13 seq72881 87.8 9e-13 seq29900 87.8 9e-13 seq284230 86.0 3e-12 seq109274 84.2 1e-11 >seq323587 Length=35388 Score = 95.1 bits (104), Expect = 6e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||||||||| | |||||||||| |||| ||||||||||||||||||| Sbjct 27623 AAAAAAAAAAATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGAC 27682 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 27683 GCTCTAACCAACTGAGCTAACCGGCC 27708 >seq305302 Length=18055 Score = 95.1 bits (104), Expect = 6e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||| | |||||||||| |||| ||||||||||||||||||| Sbjct 4862 AAAAAATTACATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGAC 4803 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 4802 GCTCTAACCAACTGAGCTAACCGGCC 4777 >seq97875 Length=128213 Score = 95.1 bits (104), Expect = 6e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||| | |||||||||| |||| ||||||||||||||||||| Sbjct 26200 AAAAAATTAGATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGAC 26141 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 26140 GCTCTAACCAACTGAGCTAACCGGCC 26115 Score = 93.3 bits (102), Expect = 2e-14 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || || ||| || ||||||| | |||||||||| |||| |||||||||||||||| Sbjct 38258 AAAAAGAAAACAGATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCAC 38199 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| |||||||||||||| ||||| Sbjct 38198 GACGCTCTAACCAACTGAGCTAACCGGCCG 38169 >seq303549 Length=172706 Score = 93.3 bits (102), Expect = 2e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| ||||||||| | |||||||||| |||| |||||||||||||||||| Sbjct 154713 TAAAAAA--AAATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGA 154656 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 154655 CGCTCTAACCAACTGAGCTAACCGGCC 154629 >seq56357 Length=461549 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||||||||| | |||||||||| |||| |||||||||||||||||||| Sbjct 217575 AAAAAAAAAATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGACG 217516 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| |||| Sbjct 217515 CTCTAACCAACTGAGCTAACCGGCC 217491 >seq2980 Length=17486 Score = 93.3 bits (102), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 6/92 (7%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCC--ATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| || |||||| ||| | ||||||||| |||| ||||||||||||||| Sbjct 8675 ATAAAAAA--AACTTGGCCAGTATGGA--GATCGAACCCACGACATTCGCGTTATTAGCA 8620 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||| |||||||||||||| |||||| Sbjct 8619 CGACGCTCTAACCAACTGAGCTAACCGGCCGT 8588 >seq236050 Length=220430 Score = 91.5 bits (100), Expect = 8e-14 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| || |||| | |||||| | |||||||||| |||| |||||||||||| Sbjct 92941 AATTAAAAATAAAT--ACTTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTA 92884 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||| |||| Sbjct 92883 GCACGACGCTCTAACCAACTGAGCTAACCGGCC 92851 >seq223876 Length=70571 Score = 91.5 bits (100), Expect = 8e-14 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 23354 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 23295 Query 11528 CCGT 11531 |||| Sbjct 23294 CCGT 23291 >seq168555 Length=51982 Score = 91.5 bits (100), Expect = 8e-14 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| || |||||| | |||||||||| |||| |||||||||||||||| Sbjct 41850 AAAAAAAAATTAA-TTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCAC 41908 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||| |||| Sbjct 41909 GACGCTCTAACCAACTGAGCTAACCGGCC 41937 >seq2528 Length=9402 Score = 91.5 bits (100), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 11431 ATATAGAATTAA--TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| | |||||| || |||| | ||||||| | |||||||||| |||| |||| Sbjct 4070 ATAAAAAATTAACATATAAAAAAATATTGGCCAGTATGGGGATCGAACCCACGACATTCG 4129 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||| |||| Sbjct 4130 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGGCC 4170 >seq122560 Length=889155 Score = 89.7 bits (98), Expect = 3e-13 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 11427 GGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 ||||||||| || || ||| | | | ||||| | |||||||||| |||| || Sbjct 384064 GGAAATATATAACAAAAAAATACTTTTACTGGCCAGTATGGGGATCGAACCCACGACATT 384005 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||| |||||||||||||| |||| Sbjct 384004 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGGCC 383962 >seq90899 Length=62125 Score = 89.7 bits (98), Expect = 3e-13 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| |||||| | |||||| | |||||||||| |||| |||||||||||||| Sbjct 12677 TTAAAAAAAAAAAAGTTTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGC 12618 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||| |||| Sbjct 12617 ACGACGCTCTAACCAACTGAGCTAACCGGCC 12587 >seq774 Length=1099226 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 717302 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 717243 Query 11528 CCG 11530 ||| Sbjct 717242 CCG 717240 >seq296314 Length=18801 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 351 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 292 Query 11528 CC 11529 || Sbjct 291 CC 290 >seq275119 Length=1221 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 659 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 718 Query 11528 CC 11529 || Sbjct 719 CC 720 >seq235819 Length=31597 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 12344 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 12403 Query 11528 CC 11529 || Sbjct 12404 CC 12405 >seq202538 Length=77339 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 25575 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 25634 Query 11528 CC 11529 || Sbjct 25635 CC 25636 >seq182800 Length=2478 Score = 87.8 bits (96), Expect = 9e-13 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 1321 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 1380 Query 11528 CCGTCGACGA 11537 || | |||| Sbjct 1381 CCATGTACGA 1390 >seq147716 Length=2987 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 1042 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 1101 Query 11528 CC 11529 || Sbjct 1102 CC 1103 >seq72881 Length=8305 Score = 87.8 bits (96), Expect = 9e-13 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11444 AAAAAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| |||||||| | |||||||||| |||| |||||||||||||||||| Sbjct 186 AAAAAATAGTAATTGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGA 245 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 246 CGCTCTAACCAACTGAGCTAACCGGCC 272 >seq29900 Length=143366 Score = 87.8 bits (96), Expect = 9e-13 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 4252 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 4193 Query 11528 CCGTC 11532 || || Sbjct 4192 CCATC 4188 >seq284230 Length=168195 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/92 (80%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATT---GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||||||| ||||| |||| | |||||||||| |||| ||||||||||||| Sbjct 12083 AATAAAAAAAGAAATTAATGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAG 12024 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| ||||||| |||||| |||| Sbjct 12023 CACGACGCTCTAACCAACTAAGCTAACCGGCC 11992 >seq109274 Length=51841 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || | ||||| | |||||||||| |||| |||||||||||||||||| Sbjct 6752 AAAAAATAAATTATGGCCAGTATGGGGATCGAACCCACGACATTCGCGTTATTAGCACGA 6693 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| || |||||||||||||| |||| Sbjct 6692 CGCCCTAACCAACTGAGCTAACCGGCC 6666 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260435050199476