Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq56145 188 1e-42 seq101527 86.0 1e-11 >seq56145 Length=302 Score = 188 bits (208), Expect = 1e-42 Identities = 221/299 (74%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCA 212028 ||||| |||| ||| ||||| ||| | ||||||| | ||||| || ||||| Sbjct 3 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCT 62 Query 212029 GACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAA 212088 || |||||||||||||| ||||| || || |||||||| ||| | |||||||| ||||| Sbjct 63 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAG 122 Query 212089 CATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCA 212148 || |||||||||||||||||||| || ||| ||| || || ||| | ||||| || | Sbjct 123 CACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGTTCC 182 Query 212149 TTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGT 212208 ||||| ||||||||| |||||| | || || ||| | ||| | |||||||| | Sbjct 183 CTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 242 Query 212209 TTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGT 212267 || || || | ||||||| ||||| ||||||||||| || ||||| ||||| Sbjct 243 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGT 301 >seq101527 Length=647993 Score = 86.0 bits (94), Expect = 1e-11 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 144949 CCTATTTTAGTATCTGGAACTGATGGTGTAGGAACTAAAATTGAT-ATTGCACAAGCCGC 145007 |||||||| ||||| |||||||||||| || |||||| ||||| ||||| | Sbjct 262705 CCTATTTTGTTATCTTCAACTGATGGTGTTGGTACTAAA-TTGATGATTGCTTTAAATCA 262647 Query 145008 TAAT-GACTATACAACTATTGGTATAGATCTTGTTGCCATGTGTGTGAATGATATAATAA 145066 |||| | || | || ||| || |||| | ||||| |||||||| |||||| ||||| Sbjct 262646 TAATCGTTTAGAAAA-TATAGGACAAGATTTGGTTGCTATGTGTGTTAATGATTTAATAT 262588 Query 145067 CCTGTGGTGCGAAACCATTATACTTCTTAGATTATATT 145104 | ||||| ||||| |||| || |||||||||||| Sbjct 262587 GCCACGGTGCTAAACCGTTATTTTTTTTAGATTATATT 262550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 804209892489560