Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq168112 156 5e-33 seq14293 118 1e-21 >seq168112 Length=81752 Score = 156 bits (172), Expect = 5e-33 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||||||||| || ||||| || ||||| || |||| ||| ||| |||| Sbjct 32876 CCAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAA 32817 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 33805 ||| ||||| |||||| | || || | ||| | || | ||||||||| | || || | Sbjct 32816 AATGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCT 32757 Query 33806 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATT 33865 |||| ||||||| |||||||| || || ||||| ||||| | ||| ||||||| || | Sbjct 32756 CTTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACT 32697 Query 33866 GGATTGGGAAAATAACAAATC 33886 | ||||| || | |||||||| Sbjct 32696 GAATTGGAAATAAAACAAATC 32676 Score = 105 bits (116), Expect = 8e-18 Identities = 158/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| || | ||| || || || ||| ||| || || || ||||||| ||| ||||| | Sbjct 34282 CCTCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCT 34223 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | | ||| || |||| ||| || || ||||| || || || ||||| || |||||||| | Sbjct 34222 TCAACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAG 34163 Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCT-GTCATGT---ATCCACTTTTGAGCCCAATCG 33501 | | || ||||| | || || | | || || |||||||| |||||||| Sbjct 34162 CCACAACCCTCTCACTGTATG-GGTGTTCGTGATCCCCAATCCACTTCATGGCCCAATCA 34104 Query 33502 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 || |||||| | ||||| |||| || || ||||||||||| Sbjct 34103 GCTTTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAA 34063 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 32955 TCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA-GA------CATAACTC 33007 |||||||||||| ||||| ||| || |||| || ||| || ||| || | Sbjct 35409 TCTTTAAAAGTCTTCATCTGTAGAGAACTGATGG-CTAGTTGGCGATTTGTTCATTACCC 35351 Query 33008 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33067 |||| || || |||||||| || ||||| || ||||| || |||||||||||||||| Sbjct 35350 CCATCTTCTGATATTCACCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCCAATGATA 35291 Query 33068 TATTTTCCATGAAATCAAACGGATT 33092 | | |||||||| ||||| ||||| Sbjct 35290 TGTGCTCCATGAAGTCAAATGGATT 35266 >seq14293 Length=520737 Score = 118 bits (130), Expect = 1e-21 Identities = 165/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || || || || |||||||||| | | | ||||||||||| | |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63256 || || | | |||| || || ||| ||||| ||||||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCA 63315 ||||| |||| || ||||| || || || ||||| || |||||| ||||| ||| | | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63361 || ||| | |||||| ||||| || || || || | | |||| || Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGG 326348 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62322 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62381 ||||| |||| || | || || ||||| ||||| || | || || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 62382 GTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62441 || || | || | ||||| || ||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 62442 GGTGCCACCAATAAACTATTTCTAAGACCGTA 62473 || |||| || | ||| ||||| | ||| || Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 Score = 86.0 bits (94), Expect = 8e-12 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 || || || || || || | ||||||||| || |||||||| || || || || | | Sbjct 402231 TAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGCTGCAAAG 402290 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||| ||||| || || | || || || | || || || |||| |||||||| ||| Sbjct 402291 TAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAATGGGTAA 402350 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | | || || || || |||| ||||||||||||| || || || | ||| || Sbjct 402351 CGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACGGTGTTTC 402410 Query 62757 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62792 || || || ||||| || ||| ||| || ||||| Sbjct 402411 TTGTTGGAAATTTCTGC--CTGAAAT-TGAAAATAA 402443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620366633437160