Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14293 100 7e-16 seq232147 84.2 6e-11 >seq14293 Length=520737 Score = 100 bits (110), Expect = 7e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 |||||||| || |||||| | ||||| |||||| | || || |||| ||||| || Sbjct 405407 AAGACAATCAGAGCCCAGAAGTTGTGGTTCGCCATCTTTGAATCCCAGACAGAGACTGGC 405348 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 |||| || |||||||||||||| || ||| | ||||| || |||||| ||||||| Sbjct 405347 TCACCATACATGTTGTACAAAGACAGTTGTAACAGAAAGTCTAATCAGCAGAACCTTGGG 405288 Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261 ||||| || || ||| | ||||| || ||| | || |||| Sbjct 405287 ACAATCAAGTGCAGTAACTTGTGTACTGAAATTGTAGAGTACA 405245 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896 ||| || |||||||| ||| | || || ||||| ||| ||||||||||||| || | Sbjct 326346 AGGAGCTTTTGCTATCTATTTAGAACCATGGCATGCAGATGTTTTTGAGTTTCTCGACTT 326287 Query 363897 CCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 |||||| || || ||||| ||| || || | ||||| ||||| || || ||| | Sbjct 326286 AAAGAAAAATACTGGTAAAGAAGAACAACGAGCCAGGGATCTTTTCTACGCCCTGTGGAT 326227 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016 | |||||| || ||| || || |||| | | ||| | | | || || | Sbjct 326226 TCCTGACCTCTTCATGCGCCGTGTTGAGGAGAATGCCGACTGGACTTTAATGTGTCCTAA 326167 Query 364017 CGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 ||||||||| || ||| ||||||| |||||||| || Sbjct 326166 CGAATGTCCTGGGCTTGCCGATGTTTGGGGTGAAGA 326131 >seq232147 Length=1441 Score = 84.2 bits (92), Expect = 6e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 111672 ATGGCACTTCCACCATGTCAT-CTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTC 111730 ||||| ||||| || |||||| ||| ||| | | ||||||||| || | | || Sbjct 1128 ATGGCGCTTCCTCCTTGTCATGCTTTTGTTCAA-TTTTATGTAGTGGATAATAAATTATC 1186 Query 111731 ATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790 || ||| | |||||| |||| |||||| | | | ||||| ||||||||||| || Sbjct 1187 TTGTCAACTTTATCAGAGATCCGCTGATGTCTTTTTAGGTGTCCCGTTTAATATAGCTTC 1246 Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850 ||| ||||| || ||| | | ||||||| | |||||||| ||||| || | Sbjct 1247 TTATGCACTTCTAACTCACATGCTCGCTCAAGTAACAAATCTTGGTGTCGGTGATTTTGT 1306 Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGAT 111893 |||| | |||||| | ||| ||||| ||| || |||||| Sbjct 1307 TCACACCACTGGAGATACACATATTTACTTAAATCATATTGAT 1349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1297819462455582