Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq219765 125 6e-24 seq37740 100 2e-16 seq243752 84.2 2e-11 >seq219765 Length=875325 Score = 125 bits (138), Expect = 6e-24 Identities = 155/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACT-GGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||| | || ||||||||| | || || || | ||||| | ||||| ||| || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | |||||| || || |||||||||||||| ||||| ||||| Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | || || | | ||||| ||||| ||||||| | ||| | | |||||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||| |||||||| || | ||||||||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTG 72905 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || ||||||||| | || || || | ||||| | ||||| ||| || Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| || || |||||||||||||| ||||| |||||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168 ||| | || || | | ||||| ||||| ||||||| | | | |||| ||||| | Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCA--GATTACA 73166 Query 24169 ACATTCAAAAAGAATCTAC 24187 ||||||| |||||||| || Sbjct 73165 ACATTCAGAAAGAATCAAC 73147 Score = 105 bits (116), Expect = 6e-18 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| ||| | |||||| | || || || ||| | Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAA-CCATC 73513 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| || | ||||| ||| ||| |||||||||||||| ||||| ||||| Sbjct 73512 AGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCA 73453 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTAT 24167 |||| | || |||| | ||||| ||||| ||||||| | | | |||| ||||| Sbjct 73452 ACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCA--GATTAC 73395 Query 24168 AACATTCAAAAAGAATCTAC 24187 |||||||| |||||||| || Sbjct 73394 AACATTCAGAAAGAATCGAC 73375 >seq37740 Length=474 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| ||||||||| | ||||| | ||||| || ||| Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || || |||||| ||||||||||| || || || ||||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | || || ||||| ||||||| | | | | || || ||| Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAAC 126 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || ||||| ||||| || ||||| ||||| Sbjct 125 ATCCAAAAGGAATCGACTCTTCATCTAGTG 96 >seq243752 Length=40230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC-GACACCATCGAGCAAGTCAAACA 24073 ||||| || | ||||| | || || ||| ||| | |||||||| || | |||||| Sbjct 8031 ACTGGCAAGACCATTACACTTGAGGTTGAG-CCATCAGACACCATTGACAATGTCAAAGC 7973 Query 24074 AAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAA 24133 || || ||||||||||| || ||||| ||||| ||| | || || | | ||||| Sbjct 7972 TAAAATCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAA 7913 Query 24134 GCAACTCGAAGATGACAG--AAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATT 24191 ||||| ||||||| | | | |||| ||||| |||||||| |||||||| ||| | Sbjct 7912 ACAACTTGAAGATGGCCGCACATTGTCA--GATTACAACATTCAGAAAGAATCAACACTA 7855 Query 24192 CATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || | | ||||||| || Sbjct 7854 CACTTGGTCCTTCGTCTGAGAGGTGG 7829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428199510127155