Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq219765 98.7 8e-16 seq243752 89.7 4e-13 >seq219765 Length=875325 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| ||||||||||| || ||||| || ||||| |||||| | || || Sbjct 73577 TTACAGATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGA- 73519 Query 115340 TCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGT 115398 ||| | || || ||| | | || || ||||||| || ||||||||| | || Sbjct 73518 ACCATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCC 73459 Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458 ||||| || | || |||| ||| ||||||||| | ||||||| | || || | || Sbjct 73458 AGATCAACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGA 73399 Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| |||||||| ||||| || ||| | || |||| Sbjct 73398 TTACAACATTCAGAAAGAATCGACTCTGCACTTGGT 73363 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACG-GGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||| || || || ||||| ||||| || || |||||||| | ||| ||| || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | || ||| ||||| || ||||||||| | || ||||| Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || || | ||| ||||||||| | ||||||| | |||| || | |||||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||| ||||| || || | ||| | ||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTG 72905 >seq243752 Length=40230 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || |||||||| || ||||| || || |||||||| | || ||| || Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || ||| ||||| ||||||||||| | || ||||| Sbjct 7767 GACACCATTG-ACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCA 7709 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | ||||||| ||| || |||||| | ||||||| | || || | ||||| || Sbjct 7708 ACAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAA 7649 Query 115465 CATTCAAAAAGAGTCTAC 115482 |||||| ||||| || || Sbjct 7648 CATTCAGAAAGAATCGAC 7631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423626056984120