Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq95738 140 2e-28 seq304654 132 3e-26 seq219765 129 4e-25 seq37740 122 6e-23 seq61843 113 3e-20 seq160575 105 4e-18 seq277942 100 2e-16 seq129645 82.4 5e-11 >seq95738 Length=4829 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3451 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3392 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3391 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3357 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1688 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 1747 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1748 GCATGTATTTAGCCTTA 1764 >seq304654 Length=803 Score = 132 bits (146), Expect = 3e-26 Identities = 87/95 (92%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 522 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG-TAGGGACAGTGGGAATCTCGT 580 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 581 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 615 >seq219765 Length=875325 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | ||| | ||||| || ||||| || || ||||| |||||||| | Sbjct 73343 TACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTG 73402 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| || | || || | |||||| || ||||| || || || |||||||| | | Sbjct 73403 ACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAG 73462 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||||||| ||||||| ||| ||||| | | |||||| ||||| Sbjct 73463 GAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAA 73522 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| ||||||||||| || || | ||| || || || |||||||| Sbjct 73523 CCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | ||| | ||||| || ||||| || || ||||| |||||||| | Sbjct 73115 TACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTG 73174 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| || | || || | |||||| || ||||| || || || |||||||| | | Sbjct 73175 ACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAG 73234 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||||||| ||||| || ||||| | | || ||| |||| Sbjct 73235 GAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAA 73294 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | |||||| || || || || | ||||| ||||| |||||||| Sbjct 73295 CTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 95.1 bits (104), Expect = 8e-15 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 38081 CCAATCATTA-CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATAT 38139 ||| ||| || ||||| | | ||| | ||| ||||| || || || || ||||| | Sbjct 72877 CCATTCAATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGT 72936 Query 38140 TGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTT 38199 | ||||||||||| || | || || | |||||| || ||||| || || || |||| Sbjct 72937 TATAATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTT 72996 Query 38200 GATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTC 38259 |||| | || | |||||||||||| ||||| || ||||||| | || ||| Sbjct 72997 GATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTG 73056 Query 38260 CACTTTCAACTTCTAATGTAATAGTTTTACC-CGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| | |||||| || || || || | ||||| ||||| |||||||| Sbjct 73057 AGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq37740 Length=474 Score = 122 bits (134), Expect = 6e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||| | ||||||||| |||||||| || ||||| || || | ||| | Sbjct 90 ACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACC 149 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | |||||| || ||||| || || || || ||||| | |||| |||||||| Sbjct 150 ATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTT 209 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| || ||||||||||| | ||||| ||| ||||| || ||||| Sbjct 210 GTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAAT 269 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||||| || ||||| ||||||||||| || |||||| Sbjct 270 AGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCATG 306 >seq61843 Length=409 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 220 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 279 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 280 GCATGTATTTAGCCTTA 296 >seq160575 Length=2773 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2211 CTCTCTCTTCAGAGTGCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 2270 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||| || Sbjct 2271 TATGATATTTAGCTTT 2286 >seq277942 Length=7678 Score = 100 bits (110), Expect = 2e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1370 CTCTCTTCAAAGTTCTTTTCTACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGTCA 1311 Query 20009 TAATATTTAGCCTTA 20023 |||||||||||| Sbjct 1310 ATGTATTTAGCCTTA 1296 >seq129645 Length=3385 Score = 82.4 bits (90), Expect = 5e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 38185 ATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACAT 38244 |||| || || |||||||| | || | |||||||||||| ||||||| ||| |||| Sbjct 704 ATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACAT 645 Query 38245 TCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCA 38304 | | | |||||| |||||| |||| ||||||||||| || || | ||| || | Sbjct 644 TTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGA 585 Query 38305 CGAATATCTGCAT 38317 | || |||||||| Sbjct 584 CAAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333594365111231