Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq168112 170 2e-37 seq14293 123 3e-23 >seq168112 Length=81752 Score = 170 bits (188), Expect = 2e-37 Identities = 157/199 (79%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 ||||||||||||||||| || ||||| || ||||| || |||| ||| ||| |||||| Sbjct 32874 AAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAAAA 32815 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 | ||||| |||||| | || || | ||| | || | ||||||||| | ||||| ||| Sbjct 32814 TGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCTCT 32755 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || ||||||| |||||||| || || ||||| ||||| | ||| |||||||| || ||| Sbjct 32754 TCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACTGA 32695 Query 33225 ATTGGAAAAATAACAAATC 33243 |||||||| | |||||||| Sbjct 32694 ATTGGAAATAAAACAAATC 32676 >seq14293 Length=520737 Score = 123 bits (136), Expect = 3e-23 Identities = 166/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || || || || |||||||||| | | || ||||||||||| | |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63111 || || | | |||| || || ||| ||||| ||||||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCA 63170 ||||| |||| || ||||| || || || ||||| || |||||| ||||| ||| | | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || ||| | |||||| ||||| || || || || | | |||| || Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGG 326348 Score = 102 bits (112), Expect = 1e-16 Identities = 115/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 63821 TTTTTTGTT-TCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 63879 ||| ||| | |||||||||| ||| || || || |||| ||||| || || |||||||| Sbjct 329155 TTTCTTGCTCTCTTTGTGTAAATTAGAAACAGCGATTCGCGCGGCCAGGATAGCATAATC 329214 Query 63880 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 63939 ||||||| ||||| ||| |||||| |||| ||||||| | |||| | || || || Sbjct 329215 TGGATGTTTCGTAGTCATAGTCGCTGCTGTTTCTGCTGCCAAATTGTCGAGCTCAACAGT 329274 Query 63940 TGTTACACCATTATATATTCCTTGGATAACCTT 63972 ||||||||| | || | ||| | ||| || || Sbjct 329275 TGTTACACCTTGGTACAATCCATTGATGACTTT 329307 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62177 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62236 ||||| |||| || | || || ||||| ||||| || | || || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 62237 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62296 || || | || | ||||| || ||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 62297 GGTGCCACCAATAAACTATTTCTAAGACCGTA 62328 || |||| || | ||| ||||| | ||| || Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 || || || || || || | ||||||||| || |||||||| || || || || | | Sbjct 402231 TAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGCTGCAAAG 402290 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 ||||| ||||| || || | || || || | || || || |||| |||||||| ||| Sbjct 402291 TAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAATGGGTAA 402350 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | | || || || ||||||| ||||||||||||| || || || | ||| || Sbjct 402351 CGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACGGTGTTTC 402410 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62647 || || || ||||| || ||| ||| || ||||| Sbjct 402411 TTGTTGGAAATTTCTGC--CTGAAAT-TGAAAATAA 402443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631007171519600