Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq219765 140 3e-28 seq37740 116 3e-21 seq243752 111 1e-19 >seq219765 Length=875325 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| || | || || || |||| ||| | ||||| ||| | || Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| |||| || ||||||||||| ||||| || || Sbjct 73283 GACACCATTGAAAATGTCA---AAGCCAAAATCCAA-GACAAAGAAGGCATTCCTCCAGA 73228 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| | || ||||| ||||||||| | ||||||| |||||| || ||||| Sbjct 73227 TCAACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTA 73168 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| ||||| |||||||| || || || || || || | ||||||||||| Sbjct 73167 CAACATTCAGAAAGAATCAACTCTGCACTTGGTCCTTCGTCTAAGAGGAGG 73117 Score = 136 bits (150), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | || || | || || || | || Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | ||||||| ||| ||||||||||| ||||| || || Sbjct 73511 GATACCATTGAAAATGTCA---AGGCAAAAATTCAA-GACAAAGAAGGCATTCCTCCAGA 73456 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| | |||||||| ||||||||| | ||||||| |||||| || ||||| Sbjct 73455 TCAACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTA 73396 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| ||||| |||||||| || || || || || || | ||||||||||| Sbjct 73395 CAACATTCAGAAAGAATCGACTCTGCACTTGGTCCTTCGTCTAAGAGGAGG 73345 Score = 122 bits (134), Expect = 8e-23 Identities = 159/216 (74%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACC-GGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||| || || ||||| || | || || || |||| ||| | ||||| ||| | || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || ||| | || |||| |||| || ||||||||||| ||||| || || Sbjct 73055 AGACACCATTGAG--AATGTCAAAGCCAAAATCCAA-GACAAAGAAGGCATTCCTCCAGA 72999 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| | || ||||| ||||||||| | ||||||| || || || ||||| Sbjct 72998 TCAACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTA 72939 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| |||||||| || || ||||||||||| Sbjct 72938 TAACATTCAGAAAGAATCAACCCTGCATTTAGTGCT 72903 >seq37740 Length=474 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| || ||| | || || | ||||| || | ||| Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| ||||| | || | ||| ||||||||||| || ||||| || || Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAA-GACAAAGAAGGAATCCCACCAGATCA 187 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| || |||||| | ||||||| ||| || | || ||||| Sbjct 186 GCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAA 127 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 || ||||| ||||| || || ||| ||||||| | || | ||||| || Sbjct 126 CATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGGCAA 76 >seq243752 Length=40230 Score = 111 bits (122), Expect = 1e-19 Identities = 144/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCA 25089 |||| ||| | || || ||| | || ||||| || || || || |||| |||| || Sbjct 8021 CCATTACACTTGAGGTTGAGCCATCAGACACCATTGA--CAATGTCAAAGCTAAAATCCA 7964 Query 25090 CTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAG 25149 ||||||||||| ||||| || || || ||||| | || ||||| ||||||||| | | Sbjct 7963 A-GACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAAACAACTTG 7905 Query 25150 AAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGC 25209 |||||| ||||| || |||||||| ||||| |||||||| || ||||| || || | Sbjct 7904 AAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACACTTGGTCC 7845 Query 25210 TAAGGCTAAGAGGAGG 25225 | | || ||||| || Sbjct 7844 TTCGTCTGAGAGGTGG 7829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431577810009815