Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq56145 178 1e-39 >seq56145 Length=302 Score = 178 bits (196), Expect = 1e-39 Identities = 221/300 (74%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 166453 CCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCT 166512 ||||||||||| || | || || ||| || | || ||| | |||||||| ||||||| Sbjct 3 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCT 62 Query 166513 GACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAG 166572 || | ||||| | || || ||| || ||||||| ||| |||| ||||| |||||| Sbjct 63 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAG 122 Query 166573 CACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCA 166632 ||||||||||| |||||||| || || ||||| || ||||| ||||||||||| || || Sbjct 123 CACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGTTCC 182 Query 166633 CTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGA 166691 || ||| || ||||| || | | || || | || | | | || | || ||||| || Sbjct 183 CTATTCAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGA 241 Query 166692 AACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT 166751 || ||| ||| || | ||||||| || |||||||||||||| || || || ||||| Sbjct 242 AAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564882234349600