Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq168112 149 7e-31 >seq168112 Length=81752 Score = 149 bits (164), Expect = 7e-31 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| | ||||||||| ||||| ||||| ||| ||||| || |||| || || || Sbjct 32878 TACCAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGAT 32819 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT--AGATCTTTTGAAAGATCG 93592 |||||| || || || ||| ||||| ||||| | ||| |||||||| || | || Sbjct 32818 AAAATGCTTTTCTTCTGGTTTCAGCTTCTCCCAGT--GATCAAGATCTTTAGACAAGTCC 32761 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 || ||||| | ||||| || |||||||| |||||||||||||| | ||| ||||| || Sbjct 32760 ACCTCTTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGG 32701 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 || ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct 32700 TACTGAATTGGAAATAAAACAAATCGCCCGGGGTTTTCTTTTAACAAAGGCTC 32648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 |||||||| || ||||| | ||||||||| || ||||||||||| |||||||| Sbjct 33277 ATGTATGTGTCAATTAATAAGCTGTACATTTCACTGTGAACATTCTCCATGGCAATTTGA 33218 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 || || |||||||| | |||||| || | || ||||||| | |||||| || || Sbjct 33217 AAACCATAGAAACAACGAGCTTCTGTCACTTGAACTTCTTTACTAAATCTTTCAAC 33162 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 92785 TTATTCATAACACCACATTTT-TGGTATTCCCCAACttttttttCAAAGAAATTTGTCTT 92843 || ||||| || || ||| || || ||||| |||||||| |||||||||||||||||||| Sbjct 35363 TTGTTCATTACCCC-CATCTTCTGATATTCACCAACTTTCTTTTCAAAGAAATTTGTCTT 35305 Query 92844 TCCTTCCAAAGATAT 92858 ||||||||| ||||| Sbjct 35304 TCCTTCCAATGATAT 35290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554553997175240