Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq219765 100 2e-16 seq37740 86.0 5e-12 >seq219765 Length=875325 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACC-GGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||| || || || ||||| | || ||||| |||||||| | ||| || ||| Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | || ||| ||||| |||||||||||| |||| ||||| Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || || | ||| ||||||||| | |||||| ||| || | |||||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAAT 111417 || || |||||||| || || ||||||||| | ||||| || |||||| || Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTGCTTCGTCTCCGTGGTGGCTAT 72884 Score = 100 bits (110), Expect = 2e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 111180 TTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGA 111239 |||| | ||||| ||||||||||| || | || || ||||| |||||| | || || Sbjct 73578 TTTACAGATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGA 73519 Query 111240 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111299 ||| ||| | ||| | || || ||||||| |||||||||||| |||| Sbjct 73518 ACCATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCC 73459 Query 111300 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111359 |||||||| | || |||| ||| ||||||||| | |||||| ||| || | || Sbjct 73458 AGATCAACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGA 73399 Query 111360 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111404 ||| || || || |||||||| || || || || || | ||||| Sbjct 73398 TTACAACATTCAGAAAGAATCGACTCTGCACTTGGTCCTTCGTCT 73354 >seq37740 Length=474 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || ||||| |||| || ||||| ||||| ||||| ||| || Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || || ||| ||||||||||| | || ||||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || |||| || | ||| || |||||| | |||||| | || | | || || || Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAAC 126 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111416 || ||||| ||||| || || ||| ||||| | ||||| || || ||||| Sbjct 125 ATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGGCAA 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421331362724200