Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq219765 143 2e-29 seq243752 138 9e-28 seq37740 116 3e-21 seq129645 91.5 1e-13 >seq219765 Length=875325 Score = 143 bits (158), Expect = 2e-29 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| |||||||| || || | || || ||||| | || || || || ||| Sbjct 73576 TACAGATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAAC 73517 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | |||||| | || || |||| ||||||||||||||| || || ||||| || | Sbjct 73516 CATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAG 73457 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 ||||||| ||||| || ||||| |||||||| | || ||| |||||| | || |||| Sbjct 73456 ATCAACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATT 73397 Query 22394 ACAACATTCAAAAAGAATCCAC 22415 |||||||||| |||||||| || Sbjct 73396 ACAACATTCAGAAAGAATCGAC 73375 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || || | || |||||||| || || | Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| ||||| |||||||| || || ||||| || |||||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| |||||||| | || ||| |||||| | || ||||||||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| |||||||| || Sbjct 73163 ATTCAGAAAGAATCAAC 73147 >seq243752 Length=40230 Score = 138 bits (152), Expect = 9e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || | || ||||| || || || | Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || ||||| ||||| ||||| || || || |||||||| |||||| Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || ||||| | || ||| |||||| | || ||||||||| Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| |||||||| || | |||||||| Sbjct 7647 ATTCAGAAAGAATCGACACTGCATTTAGT 7619 Score = 113 bits (124), Expect = 4e-20 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || ||||| || || | | || ||| | ||| || ||||| ||||| |||||||| Sbjct 8016 ACACTTGAGGTTGAGCCATCAGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAA 7957 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 || || ||||| || ||||| || ||||| || ||||| |||||||| | || ||| | Sbjct 7956 GAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGC 7897 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| | || |||||||||||||| |||||||| || |||| || || Sbjct 7896 CGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACACTTGGT 7847 >seq37740 Length=474 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || || ||||| | ||| | ||||| ||| || | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || ||||||||||| || || || ||||| ||||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || ||||| | || ||| || ||| | || || |||||| Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAAC 126 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || | ||| |||| | || | || ||||| Sbjct 125 ATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGG 79 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| || ||||| || || ||||| ||||| ||||| || || ||||||||||| Sbjct 449 AAGATTCAGGATAAGGAAGGAATCCCACCAGATCAGCAACGACTCATTTTTGCCGGCAAG 390 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||| ||| | || || |||||||| || || ||||||||| | ||| Sbjct 389 CAGCTTGAGGATGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAATCCACCCTCCAT 330 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 | || | || | || ||||| Sbjct 329 CTGGTACTTCGTCTTCGTGGAGG 307 >seq129645 Length=3385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| |||||||| || || | || || ||||| | || || || || ||| Sbjct 567 TACAGATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAAC 626 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | |||||| | || || |||| ||||||||||||||| || || ||||| || | Sbjct 627 CATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAG 686 Query 22334 ATCAACAACGTCTTATAT 22351 ||||||| ||||| |||| Sbjct 687 ATCAACAGCGTCTCATAT 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418032739725565