Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq219765 161 2e-34 seq37740 140 6e-28 seq129645 123 5e-23 seq243752 120 6e-22 seq286220 86.0 1e-11 seq239451 86.0 1e-11 seq220984 86.0 1e-11 >seq219765 Length=875325 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||||||| || || || ||||| || ||||| ||||| || Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | || || || || || ||||| | ||||| || || ||| Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||||||||| ||||||||||| || ||||| |||| || ||| || Sbjct 73465 ATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACC 73524 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || ||||| || |||||||||||||| || |||||||| Sbjct 73525 TCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||||||| || || || ||||| || ||||| ||||| || Sbjct 73117 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGAC 73176 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | || || || || || ||||| | ||||| || || ||| Sbjct 73177 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73236 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| |||||||| || || || ||||| || |||||||||| | || ||| Sbjct 73237 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACT 73296 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| || || ||||| || || ||||| |||||||| Sbjct 73297 TCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 129 bits (142), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 || ||| || || || || || | || || || || || || ||||| || ||||||| Sbjct 72880 TTCAATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTAT 72939 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || | || | |||||||| | || || || || || ||||| | ||||| | Sbjct 72940 AATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGAT 72999 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||||||||| |||||||| || || || ||||| ||| |||||||||| | Sbjct 73000 CTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGG 73059 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCC-CGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | || ||||| || || ||||| || || ||||| |||||||| Sbjct 73060 GCTCAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq37740 Length=474 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 || ||||| ||||| || | || | || || || || || ||||||||||| || || Sbjct 76 TTGCCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCC 135 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || || || | |||||||| | || ||||| || || ||||| | || || || ||| Sbjct 136 GAAAGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGT 195 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 || || ||||| |||||||||||||| ||||| || ||| || || || | | |||| Sbjct 196 GGGATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCT 255 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || |||||||| || | || || ||||| || ||||| Sbjct 256 ACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 >seq129645 Length=3385 Score = 123 bits (136), Expect = 5e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68329 ATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGG 68388 ||||||| | ||||| || || ||||||||||| ||||||||||| ||||||||||| Sbjct 704 ATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACAT 645 Query 68389 CCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGA 68448 || ||||| |||| || ||| || || | ||| || ||||| || ||||||||||||| Sbjct 644 TTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGA 585 Query 68449 CGAATATCTGCAT 68461 | || |||||||| Sbjct 584 CAAAAATCTGCAT 572 >seq243752 Length=40230 Score = 120 bits (132), Expect = 6e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || || || || || ||||| || ||||| ||||| || | || | |||||||| Sbjct 7619 ACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 7678 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || || || || || | ||||| || |||||||| ||||| || ||||| Sbjct 7679 AGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGG 7738 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || |||||||||| | || || || | || ||||| || Sbjct 7739 ATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTG 7798 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||||||||| || |||||||| Sbjct 7799 CCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 113 bits (124), Expect = 8e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| || || ||||| || ||||| ||||| || | ||| | |||||||| Sbjct 7847 ACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCA 7906 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || || || ||||| | || || || || ||||| ||||| |||||||| Sbjct 7907 AGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGG 7966 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || |||||||||| || || || || | || ||||| || Sbjct 7967 ATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGTCTTG 8026 Query 68433 CCCGTGAGGGTCTTGAC 68449 || ||| || | ||||| Sbjct 8027 CCAGTGTGGCT-TTGAC 8042 >seq286220 Length=194292 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 28160 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 28219 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 28220 CCCACGTTGGGC 28231 >seq239451 Length=43065 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 186 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 127 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 126 CCCACGTTGGGC 115 >seq220984 Length=35235 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 6327 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 6268 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 6267 CCCACGTTGGGC 6256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917804567687720