Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq219765 149 5e-31 seq243752 129 5e-25 seq37740 114 1e-20 seq129645 93.3 4e-14 >seq219765 Length=875325 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||| | | || || || | || |||||||| |||||||||||||| Sbjct 73114 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCT 73173 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||||||||||||||| ||||| |||||||||||||||| || ||| Sbjct 73174 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGA 73233 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| || || ||| | | ||||| |||||| | || || Sbjct 73234 GGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCA 73293 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || |||||||| || |||||||| Sbjct 73294 ACTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||| | | || || || | || |||||||| |||||||||||||| Sbjct 73342 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCT 73401 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||||||||||||||| ||||| | |||||||||||||| || ||| Sbjct 73402 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGA 73461 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||| ||| || | | ||||| ||| || | | ||| Sbjct 73462 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCA 73521 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || || || || || |||||||||||||| Sbjct 73522 ACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 138 bits (152), Expect = 9e-28 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 114152 AATA-CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 |||| || ||||| || | | |||||||| | || |||||||| |||||||| |||| Sbjct 72883 AATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAAT 72942 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | || || || ||||||||||||||| ||||| |||||||||||||||| || | Sbjct 72943 CAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTG 73002 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 ||||||||||||||||||| || || ||| | | |||| |||||| | || | Sbjct 73003 GAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCT 73062 Query 114331 CGACGTCCACGGTCACCGTTTTGCC-GGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | || | || ||||| || || |||||||| || |||||||| Sbjct 73063 CAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq243752 Length=40230 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||| | || |||||||| |||||||||||||| || ||| || ||||||| Sbjct 7619 ACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 7678 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||||||||| | || ||||||||||| || || ||||| |||||||| || Sbjct 7679 AGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGG 7738 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || ||| | | |||| |||||| | || || || || | || | || ||| Sbjct 7739 ATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTG 7798 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || ||||| |||||||| Sbjct 7799 CCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 111 bits (122), Expect = 1e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || || |||| || |||||||| |||||||||||||| || || || ||||||| Sbjct 7847 ACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCA 7906 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 |||||||| ||||| ||||||||||||| || || |||||||| ||||||||||| Sbjct 7907 AGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 7962 >seq37740 Length=474 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | |||| ||| | || ||||| ||||| |||||||| || Sbjct 79 CCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAA 138 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| ||||||||||||||| || || ||||||| ||||| || || || || Sbjct 139 AGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGG 198 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| |||||| || | | |||| || || | || ||| || Sbjct 199 ATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACT 258 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 |||| || | ||||| || |||| ||||| || ||||| |||||| || Sbjct 259 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCATGCCT 309 >seq129645 Length=3385 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 114249 TAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC 114308 || |||||||||||||| || |||||||||||||||||||| ||| ||| || | Sbjct 705 TATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACA 646 Query 114309 TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTT 114368 | ||||| ||| || | | ||| || || | ||| | ||||| || || || || || Sbjct 645 TTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTG 586 Query 114369 ACAAAAATCTGCAT 114382 |||||||||||||| Sbjct 585 ACAAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418437498296412