Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq37740 116 9e-21 seq243752 113 1e-19 seq219765 109 1e-18 >seq37740 Length=474 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || ||| |||||||| || ||||| | || || || || ||| Sbjct 94 AGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCT 153 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | |||||| ||||| ||||| || ||||| ||| ||||||||||||||| || Sbjct 154 TCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 213 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || || || || ||||| || || || | ||| | ||||||||| | || || || Sbjct 214 TGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTT 273 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||| || || ||||| || ||||| Sbjct 274 TTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 >seq243752 Length=40230 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| | || | ||| || | ||| | || |||||| || || || || || Sbjct 7598 TGGCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCT 7657 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | ||||| || ||||| | |||||| || || || || |||||||||||| | Sbjct 7658 GACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGT 7717 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||||||||| |||||||| ||||| || || || || | || | || Sbjct 7718 GGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCA 7777 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || || || |||||||| || |||||||| Sbjct 7778 ACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 >seq219765 Length=875325 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || || || | | ||||| || ||||| | |||||| || || || Sbjct 73152 TTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAA 73211 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| ||||||||||| |||| || || |||||||| || |||||||| ||||| || Sbjct 73212 GATGAGACGCTGTTG---ATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGAC 73268 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | || | || ||||| || || || ||||| || || || || || Sbjct 73269 ATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTT 73328 Query 288459 GACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 73329 TACGAAGATCTGCAT 73343 Score = 107 bits (118), Expect = 5e-18 Identities = 164/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | || |||||| || || ||||| || | Sbjct 72888 CCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGAC 72947 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || || ||||| | |||||| || || ||||| ||||||||||| |||| Sbjct 72948 AAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTG---ATCTGGA 73004 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| || |||||||| ||||| || || || || | || | || Sbjct 73005 GGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCA 73064 Query 288424 ACTTCGAGCGTGATCGTCTT-CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| || || || || || ||||| |||||||| Sbjct 73065 ACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || || || | | ||||| || ||||| | |||||| || || || Sbjct 73380 TTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAA 73439 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || ||||||||||| |||| || || |||||||| || || ||||| || || || Sbjct 73440 AATGAGACGCTGTTG---ATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGAC 73496 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | ||| || || || || || || ||||| || || ||||| Sbjct 73497 ATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTT 73556 Query 288459 GACGAATATCTGCAT 288473 ||| || |||||||| Sbjct 73557 GACAAAAATCTGCAT 73571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174645498574878