Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq37740 161 1e-34 seq219765 134 1e-26 seq243752 122 9e-23 seq316807 86.0 6e-12 >seq37740 Length=474 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||||||||||| |||||||| ||||| |||||||| || | | ||| || | ||| Sbjct 94 AGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCT 153 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || || || ||| | |||||||||||||| || || || ||||||||||| ||| Sbjct 154 TCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 213 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | |||||| ||| || ||||| | ||| | || Sbjct 214 TGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTT 273 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| ||||| |||||||||||||| Sbjct 274 TTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||| || || |||||||| || | | ||| || | || Sbjct 321 AAGTACCAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCATC 380 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||||||| ||||||| || ||||| || || || |||||||| || || Sbjct 381 CTCAAGCTGCTTGCCGGCAAAAATGAGTCGTTGCTGATCTGGTGGGATTCCTTCCTTATC 440 Query 64351 TTGTATTTT 64359 || || || Sbjct 441 CTGAATCTT 449 >seq219765 Length=875325 Score = 134 bits (148), Expect = 1e-26 Identities = 161/215 (75%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||||| ||| | || |||||||| |||||||| ||||| | | ||| || | || Sbjct 72902 AAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATC 72961 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| || ||||| ||| | ||||| ||||| || || |||||||| |||||||| || Sbjct 72962 TTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTC 73021 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| ||||| ||||| ||| ||| | || || || || ||||| | || | || Sbjct 73022 TTGGATTTTG-GCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGG 73080 Query 64410 TCTTGCCG-GTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || | ||||||||||| || ||||| Sbjct 73081 TCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| |||||||||||||||| | ||||| | |||||||| || ||||| Sbjct 73147 GTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCA 73206 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||| || || |||||||| |||||||| ||||| | |||| ||||| Sbjct 73207 GCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGA-TTTTGGCTTT 73265 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || || || || ||||| | || | ||||||||| || | || Sbjct 73266 GACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTGTGAGTGT 73325 Query 64426 TTTTACGAAAATTTGCAT 64443 ||||||||| || ||||| Sbjct 73326 TTTTACGAAGATCTGCAT 73343 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||||||||| |||||||||||||||| | ||||| | |||||||| || ||||| Sbjct 73375 GTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCA 73434 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| ||||| || || |||||||| |||||||| ||||| |||||| ||| Sbjct 73435 GCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTG 73494 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || || |||| || | || || || || | || Sbjct 73495 ACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTC 73554 Query 64427 TTTACGAAAATTTGCAT 64443 || || ||||| ||||| Sbjct 73555 TTGACAAAAATCTGCAT 73571 >seq243752 Length=40230 Score = 122 bits (134), Expect = 9e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | ||||||||||| |||||||||||||||| | ||||| | || Sbjct 7615 AAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATC 7674 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| || || || ||| |||| || ||||| || || || |||||||||||||| || Sbjct 7675 TTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATC 7734 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | |||| ||||| ||| || | || || || || || || | || | || Sbjct 7735 TTGGA-TTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGG 7793 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || | || || || || || ||||| Sbjct 7794 TCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 118 bits (130), Expect = 1e-21 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| |||||||||||||||| | ||||| | |||||||| || ||||| Sbjct 7859 GTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCAAGTTGTTTGCCA 7918 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| | ||||| |||||||| || ||||||||||||||||| ||||| ||||| Sbjct 7919 GCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTT 7971 >seq316807 Length=102120 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||||||||| | || || |||||||||||||| || || | | || || | Sbjct 35872 TCTCAGCACTAGATGGAGGGTAGACTCTTTTTGAATGTTATAGTCAGATAGAGTACGTCC 35931 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||||||||||| || || ||| |||| | || |||||| || |||||||| ||| Sbjct 35932 ATCTTCAAGCTGTTTCCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATGCCT 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497575015170440