Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq243752 109 5e-19 seq219765 105 7e-18 >seq243752 Length=40230 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| || ||| | |||||||| | | || || || ||||||||||| || Sbjct 7600 GCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGA 7659 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || || || ||||||||||| | | | || ||||||||||| || || || Sbjct 7660 CAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGG 7719 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || |||||| ||| | |||| || | |||||| | | ||| | Sbjct 7720 AATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTG-TCAATGGTGTCTGAGGGCTCAA 7778 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| || || || ||||| |||||||| Sbjct 7779 CCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || || |||| |||| || || ||||||||||| || | Sbjct 7829 CCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGAC 7888 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || |||||||| || | | |||| |||||||| || || ||||| Sbjct 7889 AATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGA 7948 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| |||||| ||| | |||| || | |||||| | | ||| || Sbjct 7949 ATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTG-TCAATGGTGTCTGATGGCTCAAC 8007 Query 138567 CTCGACCGTCAGCGTTTTACCAGT 138590 ||| | || | || || ||||| Sbjct 8008 CTCAAGTGTAATGGTCTTGCCAGT 8031 >seq219765 Length=875325 Score = 105 bits (116), Expect = 7e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || ||||||||||| || || ||| || || || |||||||| || | Sbjct 73148 TTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAG 73207 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| ||||||||||| || ||||| || ||||||||||| |||||| ||| | Sbjct 73208 CAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGA 73267 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | ||| | |||||| | | ||| || || | || | || || || || || |||| Sbjct 73268 CATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTT 73327 Query 138599 TTACAAAAATCTGCAT 138614 |||| || |||||||| Sbjct 73328 TTACGAAGATCTGCAT 73343 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || ||||||||||| || || ||| || || || |||||||| || | | Sbjct 73378 GATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCA 73437 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 | || ||||||||||| || ||||| || ||||||||||| ||| |||||| || | Sbjct 73438 AAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTC-TTGAATTTTTGCCTTGAC 73496 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | ||| || | | || ||||| | || | ||||| ||||| || || || Sbjct 73497 ATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTT 73556 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 73557 GACAAAAATCTGCAT 73571 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | |||||||| | | |||| || || |||||||| || || Sbjct 72886 AGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAG 72945 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || || || || || |||||||| || | | |||| ||||||||||| || |||| Sbjct 72946 ACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAG 73005 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||||||||| |||||| ||| | | || | |||||| | | ||| | Sbjct 73006 GAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAA 73065 Query 138566 CCTCGACCGTCAGCGTTTTACC-AGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || || || || || |||||||| || |||||||| Sbjct 73066 CTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494206626804720