Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq8131 277 7e-70 seq205024 233 8e-57 seq329764 120 1e-22 >seq8131 Length=585 Score = 277 bits (306), Expect = 7e-70 Identities = 218/264 (83%), Gaps = 13/264 (5%) Strand=Plus/Minus Query 16960 TTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACGTACTATGCGAAC 17019 ||||||||||||||| ||||||| || ||||||||||||||||||| ||| Sbjct 462 TTGGCGAAGGCGTTCACGTACGCTCTGAACCAGTGGCCGGCACTGATGTA---------- 413 Query 17020 GATGGCTGGGTGGAAATCGACAACAACATCGCTGAAAATGCCCTGCGGGCGGTCAGTCTG 17079 |||||||| ||| || |||||||||||||||||||| ||||| |||||| ||| Sbjct 412 ---GGCTGGGTCGAAGCTGATAACAACATCGCTGAAAATGCGCTGCGAATGGTCAGCCTG 356 Query 17080 GGTCGTAAAAACTTCCTGTTCTTCGGCTCTGATCATGGTGGTGAGCGGGGAGCGCTACTG 17139 ||||| ||||||||||||||||| |||||||| || ||||||||||| |||| ||||||| Sbjct 355 GGTCGCAAAAACTTCCTGTTCTTAGGCTCTGACCACGGTGGTGAGCGCGGAGAGCTACTG 296 Query 17140 TACAGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCAGAAAGCTACCTTCGCCAT 17199 ||||||||||||||||| ||||| ||||| | |||||||||||| ||||| || || ||| Sbjct 295 TACAGCCTGATCGGGACATGCAAGCTGAACGGCGTGGATCCAGAGAGCTATCTCCGTCAT 236 Query 17200 GTGCTTGGCGTCATAGCAGACTGG 17223 ||||| | ||||||| |||||| Sbjct 235 GTGCTCAACATCATAGCTGACTGG 212 >seq205024 Length=209 Score = 233 bits (258), Expect = 8e-57 Identities = 177/209 (85%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15046 GCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCC 15105 |||||||| ||||| | ||||||||||| ||||| || |||||||||||||| || ||| Sbjct 1 GCCTCCTGCGAACCATGAATATCCATCTCGAAACTGGCGCTTGAAAATGGCATCAATGCC 60 Query 15106 AATCTGTTGTTCAAATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCA 15165 |||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct 61 AATCTGCTGTTCAAATGGCGCCAGCAATGGCGCGAGGGAAAGCTGCTGTTACCTTCTTCA 120 Query 15166 GAGAGCCCCCAGCTACTTCCTGTGACTCTCGATGCAGCTGCCGAACAGCCAGAATCGCTC 15225 |||| || |||||||||||||||||||||||||| || |||| |||||||| || | Sbjct 121 GAGAATCCTCAGCTACTTCCTGTGACTCTCGATGCCGCAGCCGTTCAGCCAGAGCGGCAC 180 Query 15226 GCAGAGGACCCGGAAACCCTCAGTATCAG 15254 | |||| ||| || | ||||| ||||| Sbjct 181 GTTGAGGCCCCTGAGGCTCTCAGCATCAG 209 >seq329764 Length=630 Score = 120 bits (132), Expect = 1e-22 Identities = 305/463 (66%), Gaps = 11/463 (2%) Strand=Plus/Plus Query 3635 AACATGTAATCGCATTCAACCTGCTTATTTCCAGTAAATGGCTTATCGTCAGGATTACCC 3694 |||||||||||||| || |||||||||| | |||| ||||| | ||| || | Sbjct 11 AACATGTAATCGCACTCTGCCTGCTTATTGGCTTTAAAGGGCTTCTTTGCAGTTACACAC 70 Query 3695 CAACAGCAATTACCCTTGGGCCACCCATGTACTTTCCGTACTCTTCCGTTAACAACGTGA 3754 || ||| || || ||||| || || | ||| ||| | || || || || || Sbjct 71 CAGTCGCAGTTTCCGACCGGCCAACCGTGAATTTTTTTTACACGGCCCTTCACGACATGG 130 Query 3755 AGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCTCACTAATAAAG 3814 ||||| ||||| || || | ||| || || | ||||| |||||||| ||||| Sbjct 131 AGTAACCCCCAACCTTCAGGAAGATCTTCGATACGGACTATTCCAGGCTCACTGATAAAA 190 Query 3815 AATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGAAAACGCTTTTTTCTATCTGCC 3874 ||||||||||| ||||| || ||| | |||| || || |||| ||| || Sbjct 191 AATCGCCAGTCACCCATGCCTTTCTCCGGCTCGATACGGAATTCTTTCTTTCGATCAGCA 250 Query 3875 AACAAGTCAGCACGAGAACATTTCGCCTCTATCAGGCATGATGCTGAATTTCTGAATCCC 3934 | |||||| || || || || || ||||||| || || ||||| || | || || Sbjct 251 AGCAAGTCTGCTCGGGAGCACTTTGCCTCTAGGAGACAGGATGCACCGTTACGAAAACCG 310 Query 3935 ATAGCATCTGGCTGTTCTCCGGTACTGGTTACA-GCTATAAAGCGGTCATGAAAACAAAC 3993 || ||||| | ||| || || || | | || ||| | |||||||||||||| || Sbjct 311 ATTGCATCAGCCTGCTC-CCCATATGGAGTCCATGCTTTGAAGCGGTCATGAAATGCGAC 369 Query 3994 CTTGAAACCGTTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTCGCGGTGTGTTAA 4053 || || ||||| | | ||| || | | | ||||| || ||||| ||| ||||| Sbjct 370 TTTAAAGCCGTTACTTTGAAGAAATCTCCATCCTATCTGGCAAAGTTCATCGTGGGTTAA 429 Query 4054 CG---------CCATATCACTCTCCTTTGATGCGAATGCCAGC 4087 | ||| ||||||||| || | || |||||| || Sbjct 430 TGGGATTAAATTCATTTCACTCTCCCTTCACGCCAATGCCTGC 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197966646581058