Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq219765 109 4e-19 seq243752 91.5 1e-13 seq37740 89.7 4e-13 >seq219765 Length=875325 Score = 109 bits (120), Expect = 4e-19 Identities = 159/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || || || || || ||||| || ||||||||||| ||| || || | |||| Sbjct 73363 ACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATC--TGACAAAGTGCGGCCATCTT 73420 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||||||||| | || | ||||||||| || ||||| ||||| ||||| Sbjct 73421 CAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTT 73480 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| || ||| |||| || ||||| ||| || |||| |||||| |||| Sbjct 73481 GAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTT 73540 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 | || || || || || |||||||| ||||| | | || |||| Sbjct 73541 TCCCAGTGAGGGTCTTGACAAAAATCTGCATCTGTAAATTAAA 73583 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || || || || || ||||| || ||||||||||| ||| || || | |||| Sbjct 73135 ACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATC--TGACAAAGTGCGGCCATCTT 73192 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||||||||| | || | ||||||||| || ||||| ||||| ||||| Sbjct 73193 CAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTT 73252 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| ||| ||| |||| || || || || || || | |||||||| | Sbjct 73253 GGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCT 73312 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||| || |||||||| || || |||||| Sbjct 73313 TGCCTGTGAGTGTTTTTACGAAGATCTGCATA 73344 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 |||||||| ||||| || ||||| || ||||| ||||| || || ||| | |||| Sbjct 72906 ACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCA--GACAAGGTTCGGCCATCTT 72963 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||||||||| | || | ||||||||| || ||||| ||||| ||||| Sbjct 72964 CAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTT 73023 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| ||| ||| | || || || || || || || | |||||||| | Sbjct 73024 GGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCT 73083 Query 15146 TACC-TGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || ||| || |||||||| || || |||||| Sbjct 73084 TGCCTTGTGAGTGTTTTTACGAAGATCTGCATA 73116 >seq243752 Length=40230 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| || | | |||||||| || || || ||||| || ||||||||||| | Sbjct 7600 GCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATC--T 7657 Query 15009 GAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 || || || | ||||| | |||||| ||||| | || | ||||||||| || | Sbjct 7658 GACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGT 7717 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 ||||||||||| || || ||||| ||| ||| | || || || || || Sbjct 7718 GGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCA 7777 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || | |||||||| || || || || || || ||||| || |||||| Sbjct 7778 ACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 7828 >seq37740 Length=474 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||| |||||| || || || ||||| |||||||| || || | | | ||||| Sbjct 97 ACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCTTCA 156 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||| || || | || | ||||| || || ||| |||||||| ||||| | Sbjct 157 AGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGA 216 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || ||||| |||||| || || ||||| ||||| Sbjct 217 ATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTTTTT 276 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| ||||| || ||||||||||| Sbjct 277 CCAGTCAATGTTTTCACGAAAATTTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355948511693285