Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq219765 96.9 3e-15 seq243752 82.4 7e-11 >seq219765 Length=875325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||| ||||| |||||||| || ||||| ||| || Sbjct 73363 ACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73422 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| ||||| | || | ||||| ||||| ||||| ||||| || ||||| || Sbjct 73423 AGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT-TG 73481 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| ||| |||| | ||| | ||| || | || || || | ||| | ||||| Sbjct 73482 AATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTT 73541 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || |||||||||||||| Sbjct 73542 CCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq243752 Length=40230 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| |||| || || ||||| ||||| |||||||| || ||||| ||| || Sbjct 7847 ACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCA 7906 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| ||||| |||| | ||||||||||| ||||| || || || ||||| | Sbjct 7907 AGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGG 7966 Query 127025 ATTTT 127029 ||||| Sbjct 7967 ATTTT 7971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473531031992240