Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq219765 111 1e-19 seq37740 95.1 1e-14 seq243752 87.8 2e-12 seq129645 82.4 7e-11 >seq219765 Length=875325 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||||| |||||| |||||||| || || || |||||||| Sbjct 72888 CCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGAC 72947 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| ||| || | |||||| || || | || | || || || || || ||| Sbjct 72948 AAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73007 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||||||||| ||||| ||||| ||||| || | |||||| || | ||| ||| Sbjct 73008 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACT 73067 Query 45294 TCGAGAGTAACCGTTTTGCC-GGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| || ||||| || || |||||||| || || ||||| Sbjct 73068 TCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 ||||| |||||||| || || || || ||||| |||| | | ||| || | || Sbjct 73141 TGCAGAGTTGATTCTTTCTGAATGTTGTAATC--TGACAAAGTGCGGCCATCTTCAAGTT 73198 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || || | || | || || || || || |||||||||||||| ||||| |||| Sbjct 73199 GTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTT 73258 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||||| ||| | |||||| || | ||| ||||| || |||| || ||||| | Sbjct 73259 TGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTG 73318 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||||||| || || ||||| Sbjct 73319 TGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 ||||| || ||||| || || || || ||||| |||| | | ||| || | || Sbjct 73369 TGCAGAGTCGATTCTTTCTGAATGTTGTAATC--TGACAAAGTGCGGCCATCTTCAAGTT 73426 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || || | || | || || || || || |||||||||||||| |||||||||| Sbjct 73427 GTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTT 73486 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 || |||| ||| | ||| || || | || || || || |||| ||||| || | Sbjct 73487 TTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAG 73546 Query 45316 TTAGAGTTTTTACAAAAATTTGCATC 45341 | || || || |||||||| |||||| Sbjct 73547 TGAGGGTCTTGACAAAAATCTGCATC 73572 >seq37740 Length=474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| || || | | ||||||||| || || |||||||||||||| || || || Sbjct 79 CCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAA 138 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| || | |||||| ||||| | || | || ||||| || || || Sbjct 139 AGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGG 198 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || |||||||| |||||||| || || | || | || || || | || ||| Sbjct 199 ATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACT 258 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||||| ||||| || || | ||||| || ||||||||||| Sbjct 259 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 >seq243752 Length=40230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| |||||| || ||||| || || || || ||||| |||| | | ||| | Sbjct 7619 ACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATC--TGACAAAGTGCGGCCATCTT 7676 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | |||||| || || | || | || || || || || ||||| ||||||||||||| Sbjct 7677 CAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTT 7736 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 | ||||| ||||| || | |||||| || | ||| || || || |||| || | Sbjct 7737 GGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCT 7796 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || || || || ||||| || ||||| Sbjct 7797 TGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 >seq129645 Length=3385 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 45207 TATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATC 45266 ||||| | || || || || || |||||||||||||| |||||||||||| |||| Sbjct 705 TATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACA 646 Query 45267 GCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTT 45326 ||| | ||| || || | || || || || |||| ||||| || || || || || Sbjct 645 TTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTG 586 Query 45327 ACAAAAATTTGCATC 45341 |||||||| |||||| Sbjct 585 ACAAAAATCTGCATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450130771093960