Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq219765 120 7e-22 seq243752 93.3 1e-13 seq37740 89.7 1e-12 >seq219765 Length=875325 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| |||||||| || || || | |||||| || | |||||| | |||||| Sbjct 73360 AGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 73419 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || || ||||||||||| || || ||| ||| |||||| || Sbjct 73420 TCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT 73479 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| ||| ||| || ||| | ||| |||| || ||| || || | || || || Sbjct 73480 TGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTT 73539 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| || Sbjct 73540 TTCCCAGTGAGGGTCTTGACAAAAATCTG 73568 Score = 105 bits (116), Expect = 2e-17 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| || || || || | |||||| || | |||||| | |||||| Sbjct 73132 AGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 73191 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || |||||||||||||| || || ||| ||| |||||| || Sbjct 73192 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT 73251 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| || || || ||| | |||||||| | || || || | || || || Sbjct 73252 TGGAT-TTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGT 73310 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| ||||| || || || || Sbjct 73311 CTTGCCTGTGAGTGTTTTTACGAAGATCTG 73340 >seq243752 Length=40230 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || || || || || | |||||| || | ||| || | |||||| Sbjct 7844 AGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCT 7903 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || ||||||||||||||||| || ||| |||||||||| || Sbjct 7904 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCT 7963 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| || || || || | |||||||| || || || || | || || || Sbjct 7964 TGGAT-TTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGT 8022 Query 199597 CTTACCCGTG 199606 ||| || ||| Sbjct 8023 CTTGCCAGTG 8032 >seq37740 Length=474 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || ||||| || || ||||| |||| ||||||||||| | || Sbjct 313 CGAAGACGAAGTACCAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTA 372 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||| || ||||| || ||||| || || |||||| Sbjct 373 CGGCCATCCTCAAGCTGCTTGCCGGCAAAAATGAGTCGTTGCTGATCTGGTGGGATTCCT 432 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||||||||| Sbjct 433 TCCTTATCCTGAATCTT 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1173915810098867