Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq219765 104 2e-17 seq243752 87.8 1e-12 >seq219765 Length=875325 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| | ||| || ||||| |||| ||| |||||| || || || ||||| | | Sbjct 73117 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGAC 73176 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| |||| || | |||||| || |||| || | |||||| ||||| | || Sbjct 73177 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73236 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||||||| ||||| ||| | | | | ||||||| | || || Sbjct 73237 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACT 73296 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||| || || || || | |||||||||||||||||||| Sbjct 73297 TCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 96.9 bits (106), Expect = 2e-15 Identities = 170/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 39477 ACATATCCAATCA-TCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTT 39535 || || ||| ||| | ||| || || | ||| || || ||||||| || |||||| | Sbjct 72871 ACTTAGCCATTCAATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCT 72930 Query 39536 GTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAAC 39595 | || |||||||| | ||| || |||| || | |||||| || |||| || | || Sbjct 72931 GAATGTTATAATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGAC 72990 Query 39596 GCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTG 39655 |||| ||||| | || | |||||||||||| ||||| ||| | || | | | Sbjct 72991 GCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGG 73050 Query 39656 TGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACC-CGTTAAAGTTTTTACGAAGATC 39714 |||||| | || || || | ||||| || || || || | ||||||||||||||| Sbjct 73051 TGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATC 73110 Query 39715 TGCAT 39719 ||||| Sbjct 73111 TGCAT 73115 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| | ||| || ||||| |||| ||| |||||| || || || ||||| | | Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| |||| || | |||||| || ||||||| | |||||| ||||| | || Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||||||| |||||| || | | | | || |||| ||| || Sbjct 73465 ATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACC 73524 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||| ||||| || || | || || || || |||||||| Sbjct 73525 TCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq243752 Length=40230 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||| || ||| || || ||||||| || |||||| || || || ||||| | Sbjct 7600 GCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGA 7659 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 |||| ||| |||| || | |||||| || ||||||| | |||||| ||||| | || Sbjct 7660 CAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGG 7719 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | |||||||| || ||||| ||| | | | | ||||||| | || || Sbjct 7720 AATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAAC 7779 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||| || || || || | || || || ||||||||||| Sbjct 7780 CTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345966591662633