Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq219765 131 2e-25 seq37740 105 7e-18 seq168112 98.7 1e-15 >seq219765 Length=875325 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||||||||| ||||| ||||| ||||| || | || || ||| || | Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | |||| ||||||| |||||||| || ||||| | || ||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || |||||||| || || || | ||||| | || |||||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || || ||| | || ||||| ||||| || ||| | ||||| || Sbjct 73163 ATTCAGAAAGAATCAACTCTGCACTTGGTCCTTCGTCTAAGAGGAGG 73117 Score = 113 bits (124), Expect = 4e-20 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCAC-GGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||| || ||||||||||| ||||| ||||| ||||| || | || || ||| || | Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | |||| ||||||| |||||||| || ||||| | || || Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || |||||||| || || || | || ||| | || || || Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || || ||| | || |||||||| ||||| ||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTGCTTCGT 72899 >seq37740 Length=474 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | || || ||||| || || | || || || ||| | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || || | | || | || || | |||||||| ||||| || | || || Sbjct 245 GATACGATTGAGAATG-TGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCA 187 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||||||||| | || || ||||| || || || | || ||||| |||||||| Sbjct 186 GCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAA 127 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| |||| || ||| | ||||| ||| Sbjct 126 CATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGT 90 >seq168112 Length=81752 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 |||| |||||| || || || || || || || || || || ||||| ||||| ||| Sbjct 32877 ACCAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATA 32818 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCGTG-TCCTTGGACAGGTCCA 133396 ||||| || || | ||| ||| |||||||| | | | || || |||| ||||| Sbjct 32817 AAATGCTTTTC-TTCTGGTTTCAGCTTCTCCCAGT-GATCAAGATCTTTAGACAAGTCCA 32760 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAAT 133456 |||| || | ||||| || || || || |||||||||||||| ||| ||||| | Sbjct 32759 CCTCTTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGT 32700 Query 133457 ATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTCCGCTTGGG 133516 | || || ||||| | ||||| || | ||||||||| |||| |||||| | |||| Sbjct 32699 ACTGAATTGGAAATAAAACAAATCGCCCGGGGTTTTCTTTTAACAAAGGCTCCTCCTGGG 32640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498100827923840