Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq56145 205 1e-47 seq21172 84.2 3e-11 >seq56145 Length=302 Score = 205 bits (226), Expect = 1e-47 Identities = 226/301 (75%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 180145 CTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCT 180204 |||| || || || || ||||||| ||| | | || ||| | |||||||| |||| Sbjct 1 CTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCT 60 Query 180205 CTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAG 180264 |||| | ||||| | || || ||||| || ||||||| ||| |||| ||||| |||| Sbjct 61 CTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAG 120 Query 180265 AGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTT 180324 ||||||||||||| |||||||| || |||||||| || ||||| ||||| |||||||||| Sbjct 121 AGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGTT 180 Query 180325 CACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTG 180384 | || ||| || ||||| ||||| |||| |||||| || | | |||||||| | Sbjct 181 CCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAG 240 Query 180385 AAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCG 180444 ||| ||| || || | ||||||| || |||||||||||||| || || || |||| Sbjct 241 AAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCG 300 Query 180445 T 180445 | Sbjct 301 T 301 >seq21172 Length=530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142220 GTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAATCCTAT 142279 ||||||||||||||||||||||||| ||||||| |||| || || ||||||||||||| | Sbjct 415 GTAGCTCAGTTTGGTAGAGCACTCGGTTTGGGACCGAGCGGTCGCAGGTTCAAATCCTGT 474 Query 142280 C 142280 | Sbjct 475 C 475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607868223626040