Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq56145 192 7e-44 seq101527 87.8 2e-12 >seq56145 Length=302 Score = 192 bits (212), Expect = 7e-44 Identities = 211/281 (75%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 170107 GCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGT 170166 ||||| ||||| | || ||| | ||||| ||| |||||| || || |||||| |||| Sbjct 21 GCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 80 Query 170167 ATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCAC 170226 || || ||||| || ||||| ||| | |||||||| |||||||||||||| ||||||||| Sbjct 81 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCAC 140 Query 170227 CCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCAC 170286 ||||| || ||| ||| || |||||| | ||||| || | || ||| || ||||| Sbjct 141 CCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 200 Query 170287 GGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTAT 170346 ||||| | ||||| ||| | | ||||| || || ||||| || || || || | Sbjct 201 GGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 260 Query 170347 GGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGT 170387 || |||| |||||| |||||||||||||| || || || || Sbjct 261 GGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGT 301 >seq101527 Length=647993 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 104382 CTGATGGTGTTGGTACTAAAATTAATATAGCAAAGATTGCTAGAGACTTTACTAC-TATA 104440 |||||||||||||||||||| | | || || | | || | |||| | |||| Sbjct 262686 CTGATGGTGTTGGTACTAAATTGATGATTGCTTTAAATCATA-ATCGTTTAGAAAATATA 262628 Query 104441 GGACAAGACTTAGTTGCTATGTGTGTAAACGATGTAAT-TACATCTGGTGCTATACCATT 104499 |||||||| || |||||||||||||| || ||| |||| | | | ||||||| ||| || Sbjct 262627 GGACAAGATTTGGTTGCTATGTGTGTTAATGATTTAATATGCCAC-GGTGCTAAACCGTT 262569 Query 104500 ATATTTTTTAGATTATATT 104518 || |||||||||||||||| Sbjct 262568 ATTTTTTTTAGATTATATT 262550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580433544874400