Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq219765 165 2e-35 seq37740 147 5e-30 seq243752 127 5e-24 seq129645 102 2e-16 seq316807 87.8 4e-12 >seq219765 Length=875325 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| || ||||| ||||| |||||||| | | ||| | |||||||| || || Sbjct 73140 GTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTG 73199 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| || || ||||| |||||||||||||||||||||||||| ||||| Sbjct 73200 TTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTT 73259 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || ||||||||||| || || |||||||| |||| ||||| ||||| Sbjct 73260 GGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTGT 73319 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| | ||||| Sbjct 73320 GAGTGTTTTTACGAAGATCTGCAT 73343 Score = 156 bits (172), Expect = 9e-33 Identities = 160/205 (78%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || || || || ||||| ||||| || ||||| | |||| |||| |||||||| || || Sbjct 72912 TGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAG-GTTCGGCCATCTTCAAGTTG 72970 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| || || ||||| |||||||||||||||||||||||||| ||||| Sbjct 72971 TTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTT 73030 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC-TG 195115 ||||| |||||||||||||| || || |||||||| |||| ||||| || || Sbjct 73031 GGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTG 73090 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 | | ||||||||||| | ||||| Sbjct 73091 TGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| || ||||| ||||| |||||||| | | ||| | |||||||| || || Sbjct 73368 GTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTG 73427 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || || || || ||||| |||||||||||||||||||||||||||||||| Sbjct 73428 TTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 73487 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||| || |||||||| || || ||| || || ||||||| || || || || Sbjct 73488 TGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGT 73547 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 73548 GAGGGTCTTGACAAAAATCTGCAT 73571 >seq37740 Length=474 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||| || || ||||| || ||||| || | ||| || | |||||||| Sbjct 97 ACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCTTCA 156 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || ||||| ||||| || || || || ||||| || || ||||||||||||||| Sbjct 157 AGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGA 216 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || |||||||| || || || ||| ||||| | |||| || ||| Sbjct 217 ATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTTTTT 276 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| ||||| ||||| | |||||| Sbjct 277 CCAGTCAATGTTTTCACGAAAATTTGCAT 305 >seq243752 Length=40230 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || ||||| ||||| |||||||| | | ||| | |||||||| || || Sbjct 7625 TGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGT 7684 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || || ||||| || ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 7685 TTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTA 7744 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| || ||||||||||| || || || ||||| |||| ||||| || || Sbjct 7745 GCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTGCCAGTG 7804 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 7805 AGGGTCTTGACAAAGATCTGCAT 7827 Score = 122 bits (134), Expect = 2e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || ||||| ||||| |||||||| | | || | |||||||| || || Sbjct 7852 GTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCAAGTTG 7911 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| || || || || ||||||||||| |||||||||||||| ||||| Sbjct 7912 TTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTT 7971 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || ||||||||||| || || || ||||| |||| ||||| || || Sbjct 7972 AGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq129645 Length=3385 Score = 102 bits (112), Expect = 2e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || || || ||||| ||||||||||||||||||||||||||||||||| |||||| || Sbjct 702 ATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTT 643 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| || || ||| || || ||||||| || || || || | || || || Sbjct 642 TCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACA 583 Query 195130 AACACTTGCAT 195140 || | ||||| Sbjct 582 AAAATCTGCAT 572 >seq316807 Length=102120 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||| || || || || || |||||||||||||| || || || | ||||| Sbjct 35866 TCTAAGTCTCAGCACTAGATGGAGGGTAGACTCTTTTTGAATGTTATAGTCAGATAGAGT 35925 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || ||||| || || | | || || |||||||||||||| Sbjct 35926 ACGTCCATCTTCAAGCTGTTTCCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATGCC 35985 Query 195039 T 195039 | Sbjct 35986 T 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1104770657568567