Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq219765 84.2 1e-11 seq37740 84.2 1e-11 >seq219765 Length=875325 Score = 84.2 bits (92), Expect = 1e-11 Identities = 138/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||||||||||||||| || || | | |||| |||| || || ||||| || ||||| Sbjct 72923 TTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAA 72982 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || || ||| | || | || || ||||| || || |||||| | Sbjct 72983 GATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGAC--A 73040 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCC-CGTGAGAGTCTT 34966 | || || | || || |||||| || | || ||||| || || ||||| || || Sbjct 73041 TTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTT 73100 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 73101 TACGAAGATCTGCATA 73116 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||||||||||||||| || || || | | || |||| || Sbjct 73135 ACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73194 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || || || || ||| | || | || || ||||| Sbjct 73195 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73254 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | | || | || || |||||| || | || ||||| || Sbjct 73255 ATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73314 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || || |||||||||||| Sbjct 73315 CCTGTGAGTGTTTTTACGAAGATCTGCATA 73344 >seq37740 Length=474 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| |||||||||||| | || |||| || || ||||| || ||||| Sbjct 114 TTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAA 173 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| ||| | || | || || ||||| |||||| || || | Sbjct 174 GATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTAGCCTTCAC--A 231 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| ||| ||| || || || | || || |||||||| || | || ||| Sbjct 232 TTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTC 291 Query 34968 ACAAAGATCTGCAT 34981 || || || ||||| Sbjct 292 ACGAAAATTTGCAT 305 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| |||||| | || |||| || ||||| || |||||||| Sbjct 342 TTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAA 401 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||||||||| ||| | || | || ||||| || |||||| Sbjct 402 AATGAGTCGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTT 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323322421222728