Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq168112 149 7e-31 seq14293 114 1e-20 seq16 93.3 5e-14 seq309180 91.5 2e-13 >seq168112 Length=81752 Score = 149 bits (164), Expect = 7e-31 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||||||||||||| ||||| |||||||| || ||||| ||||| | ||| ||| ||| Sbjct 32877 ACCAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATA 32818 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464 ||||| ||||| |||| | | | | ||| | || || ||||||||| || || || Sbjct 32817 AAATGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACC 32758 Query 19465 TCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATAT 19524 ||||| ||||||| || || || || |||||||| ||||| | ||| || ||| | || Sbjct 32757 TCTTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTAC 32698 Query 19525 TGTATAGGAAATATAACAAATC 19546 || || ||||||| |||||||| Sbjct 32697 TGAATTGGAAATAAAACAAATC 32676 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18773 ATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCAC 18832 |||||||||||| || ||||| || || ||||||| ||||||| | |||||| |||| Sbjct 34787 ATCCTAATTCTACCAGCAGTCTGTCGGCCACAAATTCAATATATTTCCTCATCAGTTCAC 34728 Query 18833 AATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTA 18892 | |||||||| || || || || |||| |||||||||||||| ||||| || || ||| Sbjct 34727 AGTTCATTCCAATCAAATTGACGGGTAAGGCATCTGTAAGAAACTCTTGCTCAATGGTTA 34668 Query 18893 CTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAA 18952 | || |||| || || || ||| | | | ||| || | | |||| ||| Sbjct 34667 CAGCATCTGTGATGATTTCGTAAATTCTGGCCTGAGAAGGTTTGTTCACTAAATGTCTAA 34608 Query 18953 ACATCAAACATGCAAAATCACAATGTAGTCCCT 18985 ||||||| || ||||| ||||| || | |||| Sbjct 34607 ACATCAAGCAAGCAAAGTCACAGTGCAAACCCT 34575 Score = 98.7 bits (108), Expect = 1e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 18655 TTCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCC 18714 |||||||| ||||| || |||||||| ||||| | |||||||||||||| || ||||| Sbjct 35360 TTCATTACCCCCATCTTCTGATATTCACCAACTTTCTTTTCAAAGAAATTTGTCTTTCCT 35301 Query 18715 TCTAATGATATACATTCCATAAAATCAAATGGATTTT 18751 || |||||||| ||||| || ||||||||||||| Sbjct 35300 TCCAATGATATGTGCTCCATGAAGTCAAATGGATTTT 35264 >seq14293 Length=520737 Score = 114 bits (126), Expect = 1e-20 Identities = 176/246 (72%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 48108 TATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCA 48167 || || ||||| | ||||||||||| || || | |||| | | |||||||||||| Sbjct 326107 TACTTGGTATAAAGTTTCTCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCG 326166 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 ||||||||||| || | ||| || ||| | | || | ||| || | || || Sbjct 326167 TTAGGACACATTAAAGTCCAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGA 326226 Query 48228 ATCCAAAGAGC-TATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT-TT 48285 ||||| || || || ||| | |||||| | || | ||||||| || ||| |||| | || Sbjct 326227 ATCCACAGGGCGTAGAAA-AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTT 326285 Query 48286 TAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACAC 48345 ||||| | ||||| || | | ||| |||||||||||||||||||| || || | | | Sbjct 326286 TAAGT-CGAGAAACTCAAAAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTC 326344 Query 48346 CTGGTC 48351 |||||| Sbjct 326345 CTGGTC 326350 Score = 104 bits (114), Expect = 3e-17 Identities = 152/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183 |||||||||| | ||| | || | ||| | ||| ||||| |||| |||||||||||| | Sbjct 405631 TCTCAAATTCTTGACCAAAAACCTCATCAAGCCCTGGACACTCATAAGGACACATCAAAG 405690 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA- 48242 |||||| ||||| || |||| | ||| || | || || | |||||| || ||| Sbjct 405691 TCCAATCATCATCGGCTTCGACTCGACGCATGAAGAGGTCAGGAACCCAAAGTGC-ATAG 405749 Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT-TTTAAGTTCAAGAAAGTC 48301 | || | | | ||| | |||||| |||||| |||| | ||||| | ||| ||| || Sbjct 405750 GCCAGATTCTTTGCTCTCATTTCTTCTTTGCCAGTATTTTTCTTTAACTCCAA-AAACTC 405808 Query 48302 CATTATATCAGCATGCCATGGTTCTAAATA 48331 | || |||| ||||||||||||||| || Sbjct 405809 AAAAATGTCAGGATGCCATGGTTCTAAGTA 405838 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 47303 TTTTAAAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTA---TA 47359 ||| || |||||| |||| ||||| || || ||||| || | || ||| ||| || Sbjct 324714 TTTCAACAGATGATGATTGACAATCTGGAACTCTCCCGACAAAAC---ACGCCTAGAATA 324770 Query 47360 TATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGC 47419 ||||| || || || | ||||| || || || ||||||| ||||||||||||||| || Sbjct 324771 AATATTGCTGGTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGC 324830 Query 47420 TGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATA 47461 ||||||||| | || | | | || ||||| || ||||| Sbjct 324831 TGTAGGCATTGGAGCCATCAGCAGACTGTTTCTGACACCATA 324872 >seq16 Length=344243 Score = 93.3 bits (102), Expect = 5e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 65881 TTTCAAGATATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTT 65940 |||| ||||||||| |||||||||| || |||| ||| |||| ||||| ||||||||| Sbjct 157352 TTTCCAGATATTGTTCAGTTTTGTGATAAACTGGCCAATCAAGGTAAAATTGTGATAGTT 157293 Query 65941 GCAGCATTGGATGGAACATTTAAAAGAAA 65969 || ||| ||||||| |||||| ||| ||| Sbjct 157292 GCTGCACTGGATGGGACATTTCAAAAAAA 157264 >seq309180 Length=165589 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 136672 ATCTGTAGATAAAGCATTTAAAAAGTTTCCAAATGGAATATTTGCAGAAATAAAATATGA 136731 |||||| || ||||||||||||| | |||| ||||| | ||||||||| | |||||||| Sbjct 48561 ATCTGTGGAACAAGCATTTAAAAAATCTCCAGATGGATTTTTTGCAGAAGTCAAATATGA 48502 Query 136732 CGGAGAACGTGTACAGGTTCACAAGAATGGAAACCACTTTGCATTTTTTAGTAGAAACAT 136791 ||||| | |||||| |||| ||| | ||||| | ||| || || |||| | | Sbjct 48501 TGGAGAGAGAGTACAGCTTCATAAGCAAGGAAATGAATTTAAATATTATAGTCGCTCTTT 48442 Query 136792 GAAACCCGTA 136801 |||||| ||| Sbjct 48441 GAAACCTGTA 48432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559780257269640