Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq56145 178 4e-40 >seq56145 Length=302 Score = 178 bits (196), Expect = 4e-40 Identities = 221/300 (74%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 5480 ACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGC 5539 || || ||||| |||||||| ||||| |||||| | || || | || ||| | Sbjct 301 ACGATATTATAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTT 242 Query 5540 CCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAA 5599 | || ||||| | || | ||| || || | | |||||||||||| ||| | Sbjct 241 TCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTGAATAGG 182 Query 5600 GCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGT 5659 | || |||||||| ||||| || || |||||||| || || ||||||||||| ||||| Sbjct 181 GAACCGCCGAATACACCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGC 122 Query 5660 TCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCA 5719 |||||||||||||| | ||||||||| ||||||||||| || || | ||||||||||||| Sbjct 121 TCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCA 62 Query 5720 CTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGG 5778 ||||||||| || || | |||||| | || || || | |||| || || ||||| || Sbjct 61 GAGAAACTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTA-GCAGCTGCAACAGG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152048864767686