Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq101527 113 1e-19 seq232147 87.8 4e-12 >seq101527 Length=647993 Score = 113 bits (124), Expect = 1e-19 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 321590 AAGGTGGTCAACATTTAAATGTAAATGTATTATCACGTTCTCAATTAGAAGAAGCACAGA 321649 |||||| |||||||||||||||||||| || ||| |||| ||| ||||| | Sbjct 568399 AAGGTGCACAACATTTAAATGTAAATGTTTTTAATCGTGAGACATTATTAGACGCACAAA 568458 Query 321650 AATTTCCTGAAAAATATCCTCAACTTACTATTCGTGTTTCTGGATATGCAGTTCGTTTTA 321709 || || ||||||||||||||| | || ||||||||||||| ||||| || |||| Sbjct 568459 AACACCCAGAAAAATATCCTCAATTAACAGTTCGTGTTTCTGGGTATGCCGTAAATTTTG 568518 Query 321710 ATTCTCTTACGAAAGAACAACAAAATGATGTAATTTCACGAACTTTC 321756 | | || |||||||||||||| || |||||||| |||| ||| Sbjct 568519 TTAAATTAACAAAAGAACAACAAAACGACGTAATTTCTAGAACATTC 568565 >seq232147 Length=1441 Score = 87.8 bits (96), Expect = 4e-12 Identities = 198/295 (67%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 38283 GCATGGAATGTTGGTGAGCTTGATGATATGGCTCTTCAACCATGTCATAGTTTTGTTCAA 38342 ||||||||| | ||| | | |||||||| |||| || |||||| |||||||||| Sbjct 1101 GCATGGAATCCGGCAGAGGTCAAAGATATGGCGCTTCCTCCTTGTCATGCTTTTGTTCAA 1160 Query 38343 TGGGTAGTTAGTG-ATAATAAACTAAGTTGTATTCTTACCCAACGCTCAGCAGATACATT 38401 | || ||||| |||||||| || |||| ||| || | || || ||| || Sbjct 1161 TTT-TATGTAGTGGATAATAAATTATCTTGTCAACTTTATCAGAGATCCGCTGATGTCTT 1219 Query 38402 CTTGGGAGTTCCACTGAATATCACATCATATTCAGTACTCACTCATATGATAGCACAAAT 38461 || || || || | ||||| | || ||| || | || ||||| ||| | || ||| | Sbjct 1220 TTTAGGTGTCCCGTTTAATATAGCTTCTTATGCACTTCTAACTCACATGCTCGCTCAAGT 1279 Query 38462 TACTGGATTAGAAGTTGGTGAATTTATCTGGAACGGTGGAGATTGTCATATTTACTTGAA 38521 || | | || ||||| ||| | | | ||||||| ||||||||||| || Sbjct 1280 AACAAATCTTGGTGTCGGTGATTTTGTTCACACCACTGGAGATACACATATTTACTTAAA 1339 Query 38522 TCATATCGAACAAGTAAAAGAACAATTATCACGAGATACAAAAGAATTACCaaaa 38576 |||||| || |||||||| |||| | || |||| || | || | |||||| Sbjct 1340 TCATATTGATCAAGTAAACTTACAACTCACAAGAGAAACTTACAAACTTCCAAAA 1394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101759497700312