Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq320994 147 7e-31 seq203702 82.4 2e-11 >seq320994 Length=682 Score = 147 bits (162), Expect = 7e-31 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 11990 ACAAACACACTAAGGTTTAAGCATCAGGAGGTGGTTAACTTGCCTGGGGTTGATAAACCC 12049 || |||||| || | |||||||| | |||||||| | ||||| |||||||| || Sbjct 321 ACCAACACATTACGCTTTAAGCACGCTGTAGTGGTTAATCTACCTGGAGTTGATAAGCCT 262 Query 12050 TATGGCCCTGACTTAAGGGGTTGTCTTATTGCGAGAGAGGGTTATGAGTTGTTAGGCTCA 12109 ||||| |||| | | || |||||||| ||| || |||||||| | ||||| Sbjct 261 TATGGGGATGACATGCGTGGCGTACTTATTGCACCAGATGGGTATGAGTTATGTGGCTCT 202 Query 12110 GATATGTCTTCTCTCGAAGATAGGACAAAGCAGCACTACATGTGGCTGTATGACCCTGAG 12169 || | || || || ||||||||||||||||| |||||||||| ||||||| ||| Sbjct 201 GACTGCTGCTCCCTTGAGGATAGGACAAAGCAGCATTACATGTGGCCTCATGACCCCGAG 142 Query 12170 TACGTCAAGGAGATGTTGTCTCCAGACTTTGACCCTCATGTGGATATTGCAGTG 12223 ||||| ||||||||| | |||||||||||||||||| | || | |||||| Sbjct 141 TACGTTAAGGAGATGACAACACCAGACTTTGACCCTCATCTTGACTTGGCAGTG 88 >seq203702 Length=210 Score = 82.4 bits (90), Expect = 2e-11 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 37104 GCCAGCCTGTGGTGTTGGTGGTTAGGCCTGCAGTTGCTATTGTAGCGTCCCTAATGCCCT 37163 ||||||| ||||||||||| || ||||| ||||| ||||| || ||| | || |||| Sbjct 1 GCCAGCCAGTGGTGTTGGTTGTAAGGCCAGCAGTGGCTATAGTCCAGTCACGCATCCCCT 60 Query 37164 CTTTACGGCGTTGTGGGTGGTCCACTGTAATCTTTGTAGA-TGACCACTTCTCACGCAGC 37222 ||| ||| | |||||||| || | |||||| | ||| | |||||| |||||| Sbjct 61 CTTCTTTGCGCTTAGGGTGGTCTACGGCAATCTTAG-AGACGGCCCACTTTTCACGCTTG 119 Query 37223 CCCTCTTGAGGGTTGATGTACTCGGGGAAGTATC 37256 ||||| | | |||| | || |||||||||| Sbjct 120 CCCTCCTCATGGTTTACCATATCAGGGAAGTATC 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157304898518224