Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq56145 170 5e-38 >seq56145 Length=302 Score = 170 bits (188), Expect = 5e-38 Identities = 219/297 (74%), Gaps = 9/297 (3%) Strand=Plus/Minus Query 40817 TACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGT 40876 |||||| |||||||| || |||| ||||| || | || || | || |||||| | Sbjct 302 TACGATATTATAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATT 243 Query 40877 TTCCGTGGTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAA 40933 ||| ||||| |||| || | | |||| || ||| | || ||||||||| || Sbjct 242 TTCTGTGGTTTCCCTGATCAAACTAGAGGT--TACCAAAGAA-CCATGCATAGCACTGAA 186 Query 40934 CAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTT 40993 | | ||| || || || || || ||||| ||||| || ||||||||||| || ||||| Sbjct 185 TAGGGAACCGCCGAATACACCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTT 126 Query 40994 GTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACC 41053 ||| ||||| ||||| |||| ||| |||||||| || ||| ||||||||||||||||| Sbjct 125 GTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACC 66 Query 41054 ATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGC--TAG-AGCTGC 41107 |||||||||| || ||||| | || |||| ||||| ||||| ||| |||||| Sbjct 65 ATCAGAGAAACTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143136875461134