Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq243752 131 3e-25 seq37740 95.1 2e-14 >seq243752 Length=40230 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||||| ||||| || | ||||| ||| | ||||| ||| || || || || Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | ||| || | |||||| || |||||||| | | ||||||||| || || Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 ||||||||||||||||| ||||| | ||| | ||| ||| || || || | |||||| Sbjct 7721 ATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACC 7780 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || ||||| || ||||| Sbjct 7781 TCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 105 bits (116), Expect = 1e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| ||||| |||| || | ||| | ||||| ||| || || || Sbjct 7826 ATACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCT 7885 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || | |||||| || ||||| || | | ||| ||||| ||| Sbjct 7886 GACAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGA 7945 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| ||||| ||||| | ||| | ||| ||| || || || | |||| Sbjct 7946 GGAATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCA 8005 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 || || || || || || || || || Sbjct 8006 ACCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq37740 Length=474 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||| || | || | | ||| || | |||||| || ||||| || | | | Sbjct 124 ATGTTGTAGTCCGAAAGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGC 183 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| || || ||||||||||| ||||| || || | || | ||| ||| ||| Sbjct 184 TGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTA 243 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || | || ||||| | ||| |||||||| || || | ||||| || || |||||| Sbjct 244 TCAGAGGCTTCTACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGC 303 Query 193359 AT 193360 || Sbjct 304 AT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895927570402320