Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq37740 116 5e-21 seq219765 114 2e-20 seq243752 107 3e-18 >seq37740 Length=474 Score = 116 bits (128), Expect = 5e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | |||||||||||||||||||||||||| || ||||| |||| ||| Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| ||| || ||||| |||||||| || || ||||| || Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||| || || || || |||||| | || | || || || | Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACA-- 128 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 | ||||||| || |||| |||||| ||||| Sbjct 127 ACATCCAAAAGGAATCGACTCTTCATCTAGTG 96 >seq219765 Length=875325 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| ||||||||||| |||| || ||| || Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || || ||||| ||||| ||||||||||| |||||||| ||| Sbjct 73511 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 73452 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | |||| ||| || || || || |||||| | | ||||| |||||||| || Sbjct 73451 CAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73392 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| |||| || || || || | | ||||||| ||| Sbjct 73391 ATTCAGAAAGAATCGACTCTGCACTTGGTCCTTCGTCTAAGAGGAGGT 73344 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | |||||| | || || || || |||||| | ||||| || || Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || ||| ||||| ||||| ||||||||||| |||||||| ||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||| || || || || |||||| | | ||||| |||||||| || Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || || || | | ||||||| ||| Sbjct 73163 ATTCAGAAAGAATCAACTCTGCACTTGGTCCTTCGTCTAAGAGGAGGT 73116 Score = 93.3 bits (102), Expect = 6e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACT-GGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||| || || | |||||| | || || || || |||||| | ||||| || || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || ||| ||||| ||||| ||||||||||| |||||||| || Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | | || | ||| || || || || |||||| | |||| || || |||||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || ||||| | || || ||||||||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTG 72905 >seq243752 Length=40230 Score = 107 bits (118), Expect = 3e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || |||||| | || || || || Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| |||||| |||||||||||||| || || ||||| ||| Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | |||| ||| ||||| || || |||||| | | ||||| |||||||| || Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| |||| || |||||||| Sbjct 7647 ATTCAGAAAGAATCGACACTGCATTTAGT 7619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728840211091600