Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq243752 143 5e-29 seq219765 129 1e-24 seq37740 122 2e-22 >seq243752 Length=40230 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| ||||| | |||||||| | || | ||||| || || ||||| || Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| || | ||||||||||||||| || | | ||||||||| ||||| Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||||||||| |||||| ||| ||||| || | ||||| | || || Sbjct 7721 ATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACC 7780 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||| || ||||| | || || | ||| |||||||| Sbjct 7781 TCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 123 bits (136), Expect = 5e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || || |||| || | ||||| || || ||||| Sbjct 7826 ATACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCT 7885 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || |||| || | |||||| ||||||||||| | | ||| ||||| || Sbjct 7886 GACAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGA 7945 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| |||||| ||| ||||| || | ||||| | || Sbjct 7946 GGAATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCA 8005 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512 || || || |||||||| || ||||| Sbjct 8006 ACCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq219765 Length=875325 Score = 129 bits (142), Expect = 1e-24 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 192306 AATA-CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAAT 192364 |||| ||||| | ||||| | |||||||| | || | ||||| || ||||||| Sbjct 72883 AATAGCCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAAT 72942 Query 192365 CAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424 |||| || ||||| |||| || | |||||| ||||||||||| | | ||||||||| | Sbjct 72943 CAGACAAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTG 73002 Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484 | || || |||||||| ||||| ||||| ||| ||||| || | ||||| | | Sbjct 73003 GAGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCT 73062 Query 192485 CTACTTCTAGAGTAATGGTTTTACC-AGTTAATGTTTTAATAAATATCTGCAT 192536 | ||||| || |||||||| || || || | |||||| | || |||||||| Sbjct 73063 CAACTTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| ||||| ||||| | || || || | ||| | ||||| || || ||||| Sbjct 73114 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCT 73173 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| || | |||||| ||||||||||| | | ||||||||| || Sbjct 73174 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGA 73233 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||| ||||| || | ||||| | || Sbjct 73234 GGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCA 73293 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||| || || || | |||||| | || |||||||| Sbjct 73294 ACTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 >seq37740 Length=474 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || || | |||||| | |||| ||| | ||| | || || ||| || || || || Sbjct 79 CCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAA 138 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || || |||| || | |||||| || |||||||| | | ||| ||||| ||||| Sbjct 139 AGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGG 198 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||| ||||| || ||| || ||||| || | ||| || | ||||||| Sbjct 199 ATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACT 258 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | |||||| ||||| ||||| |||||||| | || || ||||| Sbjct 259 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980299823776350